Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0938
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 31 0.54
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 139 bits (337), Expect = 1e-33
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 14/189 (7%)
Frame = +1
Query: 130 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 303
LS EQ+ FY +NGYL+I+ + L ++QRF IC+ V +P + ++K+ ++ +
Sbjct: 16 LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75
Query: 304 KP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD---DITAIHSMFINKPPG---- 459
K E+ I K+Q+ D V Y ++P ++DV+ IG+ ++ A+H+M INKPP
Sbjct: 76 KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135
Query: 460 TARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--E 633
T+RHP HQDL YFP RP D I +WTA++ + + NGCL V+P +HK +L PH + P E
Sbjct: 136 TSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVVPGTHK-GVLLPH-EYPKWE 193
Query: 634 AG--KLYHG 654
G K YHG
Sbjct: 194 GGVNKAYHG 202
>Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 139 bits (337), Expect = 1e-33
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 14/189 (7%)
Frame = +1
Query: 130 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 303
LS EQ+ FY +NGYL+I+ + L ++QRF IC+ V +P + ++K+ ++ +
Sbjct: 16 LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75
Query: 304 KP-EEYINKLQEILYDDVFMTYGEHPRLLDVISQFIGD---DITAIHSMFINKPPG---- 459
K E+ I K+Q+ D V Y ++P ++DV+ IG+ ++ A+H+M INKPP
Sbjct: 76 KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135
Query: 460 TARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHGDVP--E 633
T+RHP HQDL YFP RP D I +WTA++ + + NGCL V+P +HK +L PH + P E
Sbjct: 136 TSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVVPGTHK-GVLLPH-EYPKWE 193
Query: 634 AG--KLYHG 654
G K YHG
Sbjct: 194 GGVNKAYHG 202
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 126 bits (304), Expect = 1e-29
Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 10/174 (5%)
Frame = +1
Query: 130 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSPV-MIVKEQALFEKNLK 306
LS EQK FY +NG+L+++ + L Y+ +F IC+ V P M+V + K +
Sbjct: 32 LSVEQKQFYQKNGFLLVRGCVAKDELKKYENQFNAICERKVKPPPNMLVMKDVSIAKKVT 91
Query: 307 PE--EYINKLQEILYDDVFMTYGEHPRLLDVISQFIGDD---ITAIHSMFINKPPGT--- 462
P+ + I K+Q+ + V +Y E+ ++ DV+ IG ITA+H+M INKPP T
Sbjct: 92 PDSIDTITKVQDFTDEPVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGAL 151
Query: 463 -ARHPPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHKQDILYPHG 621
+RHP HQDL YFP RP + + +WTA++ +NK NGCL V+P + + L HG
Sbjct: 152 TSRHPMHQDLIYFPWRPEELTVCAWTAMEKINKQNGCLQVVPGTQARG-LQVHG 204
>AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical
protein Y105C5B.9 protein.
Length = 288
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +1
Query: 292 EKNLKPEEYINKLQEILY--DDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPGTA 465
E + ++ +NK+ L+ D F + ++ ++ + + + SM+I K P
Sbjct: 84 ELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYIFKQPKIG 143
Query: 466 RH-PPHQDLFYFPIRPVDKIIGSWTAVDHVNKDNGCLYVIPKSHK 597
H D + + P+D + G W A+D + +NGCL IP SHK
Sbjct: 144 GAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCLSFIPGSHK 188
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 61 KMPLKGLKVLPNPVFSELPQNYRLSEEQKSFYWENGYLVI 180
++PL+ +VLPNP++ E P + +EE K+F GY+ I
Sbjct: 201 ELPLESDEVLPNPIYEE-PGDQSETEEVKAFREIFGYIQI 239
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 313 EYINKLQEILYDDVFMTYGEHPRLLDVISQF 405
EY+ KL +IL++D T+G +P ++ Q+
Sbjct: 594 EYLTKLYDILFNDETFTFGSNPSSPFLVIQY 624
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 295 KNLKPEEYINKLQE--ILYDDVFMTYGEHPRLLDVISQFIGDDITAIHSMFINKPPGTAR 468
KN+ EEYIN L+E D++ + +L+ + QF+ ++I + F PP +
Sbjct: 203 KNVDIEEYINTLRENSTEIDEIDALF----QLMPTMRQFLRNNINQLMEKFHVAPPKKSE 258
Query: 469 HPPHQDLFYFPIRPVDKI 522
P ++ + + + ++ I
Sbjct: 259 KPANRRVSFASSQDLENI 276
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 169 YLVIKELIDFTSLYS-YKQRFLQICKGIVDSPVMIVKEQALFEKNLKPEEY 318
YLV+ +++ F + + K+RF+ + K +VDS + +E + K +K + Y
Sbjct: 217 YLVLSQILLFREISTKVKKRFVDL-KCLVDSKFLTDEELKILSKEVKCDHY 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,947,482
Number of Sequences: 27780
Number of extensions: 356514
Number of successful extensions: 822
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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