Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0936
(675 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p pro... 34 0.15
AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein ... 34 0.15
AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB... 34 0.15
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA... 30 3.3
BT003645-1|AAO39649.1| 234|Drosophila melanogaster AT13908p pro... 29 4.4
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB... 29 4.4
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA... 29 4.4
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 29 4.4
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 4.4
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 29 5.8
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 29 5.8
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 29 5.8
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 29 5.8
>BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p
protein.
Length = 1144
Score = 34.3 bits (75), Expect = 0.15
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 MGKAKKGKKNQTTE-EGDSDIETTNISNAKPVQKVKKIVDSDXXXXXXXXXXXXXXXXI- 341
M KAKKGKK T+ EG S ++ IS+ VDSD
Sbjct: 1 MVKAKKGKKEILTKVEGGSSVD--EISD----------VDSDQLSLNNKQNHALKGNQAG 48
Query: 342 DEDVKEVTKNLKNVSVTNKSQKKKADVTSEDE 437
D+DVK VTK +K ++V K + K D + E+E
Sbjct: 49 DDDVKAVTKGVKKLNVKGKGKAGKNDDSDEEE 80
>AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein
protein.
Length = 1144
Score = 34.3 bits (75), Expect = 0.15
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 MGKAKKGKKNQTTE-EGDSDIETTNISNAKPVQKVKKIVDSDXXXXXXXXXXXXXXXXI- 341
M KAKKGKK T+ EG S ++ IS+ VDSD
Sbjct: 1 MVKAKKGKKEILTKVEGGSSVD--EISD----------VDSDQLSLNNKQNHALKGNQAG 48
Query: 342 DEDVKEVTKNLKNVSVTNKSQKKKADVTSEDE 437
D+DVK VTK +K ++V K + K D + E+E
Sbjct: 49 DDDVKAVTKGVKKLNVKGKGKAGKNDDSDEEE 80
>AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB
protein.
Length = 1144
Score = 34.3 bits (75), Expect = 0.15
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 MGKAKKGKKNQTTE-EGDSDIETTNISNAKPVQKVKKIVDSDXXXXXXXXXXXXXXXXI- 341
M KAKKGKK T+ EG S ++ IS+ VDSD
Sbjct: 1 MVKAKKGKKEILTKVEGGSSVD--EISD----------VDSDQLSLNNKQNHALKGNQAG 48
Query: 342 DEDVKEVTKNLKNVSVTNKSQKKKADVTSEDE 437
D+DVK VTK +K ++V K + K D + E+E
Sbjct: 49 DDDVKAVTKGVKKLNVKGKGKAGKNDDSDEEE 80
>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
protein.
Length = 1465
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 345 EDVKEVTKNLKNVSVTNKSQKKKADVTSEDESDSELEV 458
ED EV K +N +T K KKKA + D+ DS+ EV
Sbjct: 1100 EDALEVDKP-RNKKLTKKRPKKKAKLGFSDDEDSDDEV 1136
>BT003645-1|AAO39649.1| 234|Drosophila melanogaster AT13908p
protein.
Length = 234
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 672 LFQYHHHYHPSFFWLSCLFF 613
L +HHH P FWLS FF
Sbjct: 71 LHDWHHHGKPPTFWLSGFFF 90
>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
isoform B protein.
Length = 3966
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 672 LFQYHHHYHPSFFWLSCLFF 613
L +HHH P FWLS FF
Sbjct: 3803 LHDWHHHGKPPTFWLSGFFF 3822
>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
isoform A protein.
Length = 3868
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 672 LFQYHHHYHPSFFWLSCLFF 613
L +HHH P FWLS FF
Sbjct: 3705 LHDWHHHGKPPTFWLSGFFF 3724
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 29.5 bits (63), Expect = 4.4
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 174 KAKKGKKNQTTEEGDSDIETTNISNAKPVQKVKKIVDSDXXXXXXXXXXXXXXXXIDEDV 353
K K+QT E + +E + A+ QKV+ + DS+ + E +
Sbjct: 5070 KVATDTKSQTVEVSEIVLEKISEEKAEESQKVE-LKDSEAKSKKAKVLEKKST--LKEKL 5126
Query: 354 KEVTKNLKNVSVTNKSQK-KKADVTSEDESDSEL 452
E K K TNKSQK + ADV E S+ ++
Sbjct: 5127 DENDKKQKEDGATNKSQKAEAADVVPEKISEEKV 5160
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 29.5 bits (63), Expect = 4.4
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 174 KAKKGKKNQTTEEGDSDIETTNISNAKPVQKVKKIVDSDXXXXXXXXXXXXXXXXIDEDV 353
K K+QT E + +E + A+ QKV+ + DS+ + E +
Sbjct: 5070 KVATDTKSQTVEVSEIVLEKISEEKAEESQKVE-LKDSEAKSKKAKVLEKKST--LKEKL 5126
Query: 354 KEVTKNLKNVSVTNKSQK-KKADVTSEDESDSEL 452
E K K TNKSQK + ADV E S+ ++
Sbjct: 5127 DENDKKQKEDGATNKSQKAEAADVVPEKISEEKV 5160
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 351 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSE 449
+KE +K L+N+S+ ++ KKK + S+ + S+
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSD 295
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 351 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSE 449
+KE +K L+N+S+ ++ KKK + S+ + S+
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSD 295
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 351 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSE 449
+KE +K L+N+S+ ++ KKK + S+ + S+
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSD 295
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 351 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSE 449
+KE +K L+N+S+ ++ KKK + S+ + S+
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSD 295
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,399,243
Number of Sequences: 53049
Number of extensions: 304484
Number of successful extensions: 1838
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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