Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0924
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112897-1|AAI12898.1|  906|Homo sapiens CLEC16A protein protein.      29   9.9  
AB033108-1|BAA86596.1| 1117|Homo sapiens KIAA1282 protein protein.     29   9.9  
AB022696-1|BAA83590.1| 1083|Homo sapiens BEC1 protein.                 29   9.9  

>BC112897-1|AAI12898.1|  906|Homo sapiens CLEC16A protein protein.
          Length = 906

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -3

Query: 192 FFYQKVL*SKVSITESLKIFNSIIHYYSVQYTEIILCNIYIFGNQACLYYI 40
           FFY +        TE++K FN       +    I L N+Y   NQA L+YI
Sbjct: 160 FFYNEHTNDFALYTEAIKFFNHPESMVRIAVRTITL-NVYKVDNQAMLHYI 209


>AB033108-1|BAA86596.1| 1117|Homo sapiens KIAA1282 protein protein.
          Length = 1117

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
 Frame = -3

Query: 396 RTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASLPTTLLA--ELNIYHAAHRKPTISVS 223
           RT   + +G +  A    C   + +     V A+LP  LL   ++N+Y  AH   T+ + 
Sbjct: 315 RTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLL 374

Query: 222 RLEPLVPIALFFYQKVL*SKVSITESLKIFNSIIHY 115
           RL  L+P  L  Y +   S V +T  + +F  + H+
Sbjct: 375 RLLRLLP-RLDRYSQY--SAVVLTLLMAVFALLAHW 407


>AB022696-1|BAA83590.1| 1083|Homo sapiens BEC1 protein.
          Length = 1083

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
 Frame = -3

Query: 396 RTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASLPTTLLA--ELNIYHAAHRKPTISVS 223
           RT   + +G +  A    C   + +     V A+LP  LL   ++N+Y  AH   T+ + 
Sbjct: 281 RTTFVSKSGQVVFAPKSICLHYVTTWFLLDVIAALPFDLLHAFKVNVYFGAHLLKTVRLL 340

Query: 222 RLEPLVPIALFFYQKVL*SKVSITESLKIFNSIIHY 115
           RL  L+P  L  Y +   S V +T  + +F  + H+
Sbjct: 341 RLLRLLP-RLDRYSQY--SAVVLTLLMAVFALLAHW 373


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,372,186
Number of Sequences: 237096
Number of extensions: 1639458
Number of successful extensions: 6717
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6717
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)