Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0924
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.8  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 106 YGIIMNY*IKDLQ*FCDRNFALEYFLIKKKRNGY 207
           Y +  NY  K+++ + D  + L+YF+   + N Y
Sbjct: 200 YIVNTNYSSKNMREYNDPEYKLDYFMEDVELNAY 233


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -3

Query: 258 HAAHRKPTISVSRLEPLVPIALFFYQKVL*SKVSITESLKIFNSIIHYYSVQYTEIILCN 79
           H+A R   IS  R + ++   L F Q ++     I +  K     +H+Y  +   +++CN
Sbjct: 755 HSAKRPSFIS-PRSQLIICSGLVFVQILINGVWMIIDPAKA----MHHYPTREDNLLVCN 809

Query: 78  IYI 70
            Y+
Sbjct: 810 SYV 812


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 520 CVGIGDWHFPNGNLRAQCG 464
           C G G W+ P+G    + G
Sbjct: 234 CKGDGKWYLPSGGCHCKPG 252


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 330 IVSGNGSSVNASL 292
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 330 IVSGNGSSVNASL 292
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 494 SKWKLASTVW*EVWRSPRVL 435
           ++W L +T W +VWRS  VL
Sbjct: 110 NRW-LFTTDWCDVWRSLDVL 128


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 106 YGIIMNY*IKDLQ*FCDRNFALEYFLIKKKRNGY 207
           Y +  NY  K ++ + D  + L+YF+   + N Y
Sbjct: 200 YIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAY 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,605
Number of Sequences: 438
Number of extensions: 3109
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)