Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0914
(677 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 126 2e-30
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 92 8e-20
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 81 2e-16
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 68 1e-12
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 65 1e-11
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 62 5e-11
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 61 1e-10
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 60 3e-10
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 51 2e-07
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 42 6e-05
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 38 0.001
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 38 0.001
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 34 0.016
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 29 0.82
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 26 5.8
SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces ... 26 5.8
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 26 5.8
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 126 bits (305), Expect = 2e-30
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Frame = +2
Query: 50 LKLQQCLQHFVREEELDGDEKPT-CSKCGVRRKCLKWFTVQKFPQVLVLHLKRFSPTERF 226
+ L CL F + E+L G+E P C C R+ K + + P++L+ HLKRFS RF
Sbjct: 825 ITLNDCLDEFEKTEQL-GEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRF 883
Query: 227 RGKLSVVVEFPLSGLDMS----PYAAARSGAP--VYNLYAVSNHSGTTYSGHYTAYCKHP 388
R K+ +VEFP+ LDMS Y + P +Y LYAV NH G GHYTA+ K+P
Sbjct: 884 RDKIDDLVEFPIDNLDMSMRTGSYKLSEKENPKLIYELYAVDNHYGGLGGGHYTAFAKNP 943
Query: 389 HTGDWHEYNDSRVTPINPSNVVSSEAYVLFY 481
G ++ ++DSRVTP+ P V+S AY+LFY
Sbjct: 944 DNGQFYCFDDSRVTPVCPEETVTSAAYLLFY 974
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 91.9 bits (218), Expect = 8e-20
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 12/157 (7%)
Frame = +2
Query: 47 NLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLVLHLKRFSPTE-- 220
++ L+ CL F + E+LD + C C R K + + P++LV+HL RFS
Sbjct: 689 SITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGGD 748
Query: 221 -RFRGKLSVVVEFPLSGLDM----SPYAA-----ARSGAPVYNLYAVSNHSGTTYSGHYT 370
R R K +V +P+ L++ SP+ + + +Y+LYAV NH G +GHYT
Sbjct: 749 LRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHGFMSNGHYT 808
Query: 371 AYCKHPHTGDWHEYNDSRVTPINPSNVVSSEAYVLFY 481
AY + + + +++D+ + I+P ++V+S AYVLFY
Sbjct: 809 AYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFY 845
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 80.6 bits (190), Expect = 2e-16
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Frame = +2
Query: 17 LSLPIPARTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLVLH 196
L L + A+ +L L+HFV E+L K C C K T+ + P +L +H
Sbjct: 275 LDLSVDAKGSSLA--DSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIH 332
Query: 197 LKRFSPTERFRGKLSVVVEFPLSGLDMSPYAAARSGAPVYNLYAVSNHS-GTTYSGHYTA 373
KRF+ K+S + +P S ++ PY + + + Y L V H+ G+T SGHY +
Sbjct: 333 FKRFTFNGFQSSKISKQISYPES-FNLGPYMSDPNCSCWYELIGVLVHAGGSTRSGHYYS 391
Query: 374 YCKHPHTGDWHEYNDSRVTPINPSNVVSSEAYVLFYELSRT 496
+CK + G W +++D V+ + V++ +AY+L Y+ T
Sbjct: 392 FCKSSN-GVWLKFDDDFVSNSSIDRVLNQQAYILQYKRKST 431
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 68.1 bits (159), Expect = 1e-12
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 14 DLSLPIPARTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLVL 193
D+SL I T LQ CL+ FV +E++ + +C CG + +K K P + +
Sbjct: 290 DISLDINEPT----LQGCLERFVSKEKV----QYSCHSCG-SKNAIKQLVFDKLPPTICM 340
Query: 194 HLKRFSPTE-RFRGKLSVVVEFPLSGLDMSPYAAARSGAPVYNLYAVSNHSGTTYSGHYT 370
LKRF K+ V +P + L M Y + Y LY+V H GT +GHY
Sbjct: 341 QLKRFEQNNFAMSTKIDKQVSYP-AFLRMR-YNFNQDDVD-YQLYSVVCHKGTLDTGHYI 397
Query: 371 AYCKHPHTGDWHEYNDSRVTPINPSNVVSSEAYVLFY 481
AY + + W +D+ + + S V++S+AY+LFY
Sbjct: 398 AYTYYQN--QWFLLDDTTIVEVKESEVLNSQAYLLFY 432
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 64.9 bits (151), Expect = 1e-11
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Frame = +2
Query: 11 WDLSLPIPARTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLV 190
WD+ L + G L+ + +++ E L+GD G + + K + FP +L
Sbjct: 347 WDIQLNVK---GMKNLEDSFRSYIQVETLEGDNCYFADTYGFQ-EAKKGVIFESFPPILH 402
Query: 191 LHLKRFS-PTER-FRGKLSVVVEFPL---SGLDMSPYAAARSGAPVYNLYAVSNHSGTTY 355
L LKRF ER K++ EFPL + +SP A Y LY V HSG +
Sbjct: 403 LQLKRFEYDFERDMMIKINDRYEFPLEFDAKAFLSPEADQSQNCE-YVLYGVLVHSGDLH 461
Query: 356 SGHYTAYCKHPHTGDWHEYNDSRVT 430
+GHY A K G W++Y+D+RVT
Sbjct: 462 NGHYYALLKTEKDGPWYKYDDTRVT 486
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 62.5 bits (145), Expect = 5e-11
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Frame = +2
Query: 11 WDLSLPIPARTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLV 190
WD+ L + G L+ + ++ E L GD K G++ K + P VL
Sbjct: 364 WDIQLNVK---GMDTLEDSFRDAIQVETLTGDNKYYAEGHGLQ-DAHKGIIFESLPNVLQ 419
Query: 191 LHLKRFS--PTERFRGKLSVVVEFPLSGLDMSPY---AAARSGAPVYNLYAVSNHSGTTY 355
L LKRF K++ EFPL +D+ PY A +S + VY L+ V H G +
Sbjct: 420 LQLKRFDYDMLRDMMVKINDRHEFPLE-IDLEPYLSETADKSESHVYVLHGVLVHGGDLH 478
Query: 356 SGHYTAYCKHPHTGDWHEYNDSRVT 430
GHY A K +W +++D RVT
Sbjct: 479 GGHYYALIKPEKDSNWFKFDDDRVT 503
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 61.3 bits (142), Expect = 1e-10
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Frame = +2
Query: 14 DLSLPIPARTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLVL 193
DLS+ I T + CL+ F E L K C C ++ K ++K P++L L
Sbjct: 259 DLSIDIENHTS---VTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKIKKLPKILSL 315
Query: 194 HLKRFSPTERFRG--KLSVVVEFPLSGLDMSPYAAARSGAPVYNLYAVSNH-SGTTYSGH 364
HLKRF E G KL + F + A + +Y L +V H G + GH
Sbjct: 316 HLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTEDAENAERMYYLSSVIVHVGGGPHRGH 375
Query: 365 YTAYCKHPHTGDWHEYNDSRVTPINPSNVV--------SSEAYVLFY 481
Y + + T W ++D VTP+N + + + AYVLFY
Sbjct: 376 YVSIVR-TKTYGWVLFDDENVTPVNENYLQRFFGDQPGQATAYVLFY 421
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 60.1 bits (139), Expect = 3e-10
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Frame = +2
Query: 17 LSLPIPARTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVQKFPQVLVLH 196
L++PI + + LQ+CL F E L G + C C V+R K + K P+ L++
Sbjct: 255 LAIPIDDVSHVVSLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQ 314
Query: 197 LKRFSPTERFRGK----LSVVVEFPLSGLDMSPYAAARSGAPV-YNLYAVSNHSGTTYSG 361
++RF + R K L + ++ P L + + P YNL+A H G +G
Sbjct: 315 IQRFKISVMGRKKIDTPLGLSLQIPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQLENG 374
Query: 362 HYTAYCKHPHTGDWHEYNDSRVTPINPSNVVS---SEAYVLFYELS 490
HY + +W +DS V + + S +Y+LFY+ S
Sbjct: 375 HYISDVL--FNNEWCHIDDSIVRTVGGITDLREDFSSSYILFYKRS 418
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 50.8 bits (116), Expect = 2e-07
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Frame = +2
Query: 131 GVRRKCLKWFTVQKFPQVLVLHLKRFSPTERFRGKLSVVVEFPLSGLDMSPY---AAARS 301
G+RR+ F + P + H+KRF F + +V FPL DMSP+ + +S
Sbjct: 376 GMRRR----FHLMTAPPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFDMSPFIDDSFIQS 431
Query: 302 GAPV---YNLYAVSNHSGTTYS----GHYTAYCKHPHTGDWHEYNDSRVTPINPSNVVSS 460
+ YNL A H T++ ++ ++P T W++ D V I+ +
Sbjct: 432 NPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYVEEISSDMIRLG 491
Query: 461 EAYVLFYELS 490
E+++ +E S
Sbjct: 492 ESFIQLWERS 501
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 42.3 bits (95), Expect = 6e-05
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +2
Query: 152 KWFTVQKFPQVLVLHLKRF-----SPTERFRGKLSVVVEFPLSGLDMSPYAAARSGAPVY 316
K ++ P VL+LHLKRF T++ ++ + SP + S P Y
Sbjct: 378 KQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVFSP-SVRGSIHPEY 436
Query: 317 NLYAVSNHSGTTYS-GHYTAYCKHPHTGDWHEYNDSRVTPINPSNVVSSE 463
+L AV H GT+ S GHYT + W +D+ + + +V +SE
Sbjct: 437 DLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVENSE 486
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +2
Query: 176 PQVLVLHLKRFSPTERFRG-----KLSVVVEFPLSGLDMSPYAAAR---SGAPVYNLYAV 331
P V ++HLKRF G K+S +EF LD++ + S + Y L+ V
Sbjct: 743 PPVFIIHLKRFFQEISHDGYANPKKISDFIEFEQE-LDLNEFVMPHLRASSSFRYRLFGV 801
Query: 332 SNHSGTTYSGHYTAY 376
HSGT GHY AY
Sbjct: 802 IVHSGTLNYGHYVAY 816
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 56 LQQCLQHFVREEELDGDEKPTCSKC 130
L CL++F EEL G+ C C
Sbjct: 676 LIDCLKNFTHVEELSGENMFACENC 700
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 37.9 bits (84), Expect = 0.001
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Frame = +2
Query: 17 LSLPIPARTGNLKLQQC-LQHFVREEELDGDEKPTCSKCGVRRK---CLKWFTVQKFPQV 184
L LP P +GN + L RE+ + + +C K + C++ + P +
Sbjct: 192 LCLP-PEYSGNSNVSLLSLMEADREQHISDYKCDSCFKSSPKHSKTSCIRTVDWKNPPTI 250
Query: 185 LVLHLKRFSPTERFRGKLSVVVEFPLSGLDMSPYAAARSGAPVYNLYAVSNHSGTTYSGH 364
L + L+R S T + + +V + FP + + + Y L ++ HSG+ GH
Sbjct: 251 LQIQLERTSYTCQGLTRNNVSISFPSKLILKNKHH--------YILRSLITHSGSVTYGH 302
Query: 365 YTAYCKHPHTGDWHEYNDSRVTPINPSNVVSS--EAYVLFYEL 487
Y C W + NDS +T + + +S A +LFYE+
Sbjct: 303 Y--LCYRLQDDIWWKANDSLITKSSLNEALSQTRSACLLFYEM 343
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 34.3 bits (75), Expect = 0.016
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 314 YNLYAVSNHSGTTYSGHYTAYCKHPHTGDWHEYNDSRVTPINPSNV 451
Y+L AV H G GHY Y + +YND VT ++ S +
Sbjct: 1060 YDLLAVFVHRGQASFGHYWTYIHDFENNVYRKYNDEYVTVVDESEI 1105
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.82
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 17 LSLPIP-ARTGNLKLQQCLQHFVREEELDGDEKP-----TCSKCGVRRKCLKWFTVQKFP 178
L+L +P + G ++ +Q + ++ LD +P TC C + ++ FP
Sbjct: 460 LTLTVPRVKIGEIEGEQIYEEVSIDQCLDATIQPDQMEYTCEACKSKLGATTTTAMKSFP 519
Query: 179 QVLVLHLKRFSPTERFRGKLSVVV 250
+VL+L RF KLS+ +
Sbjct: 520 KVLILQANRFDLQGYQVKKLSIPI 543
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 540 WRAEPASGRALSFRYVRESS*KST*ASDETTLDGLMGVTL 421
W EP GR+ F + + K++ + +D GVTL
Sbjct: 1073 WTLEPMDGRSSQFYEILSLNKKNSYKDPQVIVDSFEGVTL 1112
>SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +2
Query: 251 EFPLSGLDMSPYAAARSGAPVYNLYAVSNHSGTTYSGHYTAYCKHPHTGDWHEYNDSRVT 430
+F + + +P S LY V+ + TT YT P G H Y +
Sbjct: 303 QFVVYNMSGNPKKQTTSSKGPTRLYEVARFNCTTRGCEYTQNIPCPRAGHSHTY---ELA 359
Query: 431 PINPSNVVS 457
P +P+ +S
Sbjct: 360 PASPNTSIS 368
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 657 HSQKSTVSKTKEYKKKNIYQVSRPPCPSSSVTRVT 553
H V EYK+ +I S PP + S+T T
Sbjct: 609 HISPPQVDSQSEYKESSILAPSNPPFETESITDST 643
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,509,461
Number of Sequences: 5004
Number of extensions: 47444
Number of successful extensions: 160
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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