Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0910
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955...    29   4.7  
02_05_0201 + 26687369-26689228                                         28   6.2  

>07_03_0919 -
           22594980-22595111,22595398-22595427,22595522-22595587,
           22596021-22596107,22596868-22596921,22597696-22597762,
           22598099-22598215,22598536-22598637,22598784-22598902,
           22598966-22599049,22599220-22599354,22599470-22599505,
           22599581-22599700,22600557-22600645,22601507-22601596,
           22601629-22601802,22602135-22602235,22602323-22602363,
           22602872-22602883
          Length = 551

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 447 KLPIHIFLVNKKYWWIAF*LRQIVLIVVNTYKYIFL*NTL*NVDRY 584
           K  IHI   N+  WW A   R +   VV+ Y+YIFL +    VD +
Sbjct: 321 KSVIHIAASNQTKWWFA--KRFLHPSVVSMYEYIFLWDEDLEVDNF 364


>02_05_0201 + 26687369-26689228
          Length = 619

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 201 DFVITDLFSELFLFYNFRGPYHDCFIRHCYLTSSY-YGFHKRC 76
           DF  T L       +  +G  H+C I H   TS    G HKRC
Sbjct: 411 DFAPTPLAPSAVSPFKKKGKVHECSICHRVFTSGQALGGHKRC 453


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,111,640
Number of Sequences: 37544
Number of extensions: 264047
Number of successful extensions: 476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)