Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0906
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 218 4e-57
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 218 4e-57
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 215 3e-56
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 215 3e-56
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 201 3e-52
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 201 3e-52
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 32 0.45
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 31 1.0
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 29 3.2
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 28 5.5
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 28 5.5
AC024882-1|AAF60940.1| 369|Caenorhabditis elegans Hypothetical ... 28 5.5
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr... 28 7.3
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 28 7.3
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 28 7.3
Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 218 bits (532), Expect = 4e-57
Identities = 103/192 (53%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Frame = +3
Query: 129 ETEYLKDNHVDYEKLIAPQAS----PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLA 296
ET+YL VD ++I Q P K +IV NV F+ LH A GLY AK
Sbjct: 20 ETQYLA---VDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQ 76
Query: 297 TSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRL 476
T +F +L+ G FGITAGAHRLWSH YK P+ I LM+ N+IA QN + W RDHR
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 477 HHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAI 656
HHK+TDTDADPHN TRGFFF+H+GWLLVRKHP VK G LDMSD+ +P+L FQ+K+
Sbjct: 137 HHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYF 196
Query: 657 PFIGTICFIIPT 692
P + CFI+PT
Sbjct: 197 PLVILCCFILPT 208
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 218 bits (532), Expect = 4e-57
Identities = 103/192 (53%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Frame = +3
Query: 129 ETEYLKDNHVDYEKLIAPQAS----PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLA 296
ET+YL VD ++I Q P K +IV NV F+ LH A GLY AK
Sbjct: 20 ETQYLA---VDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQ 76
Query: 297 TSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRL 476
T +F +L+ G FGITAGAHRLWSH YK P+ I LM+ N+IA QN + W RDHR
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 477 HHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAI 656
HHK+TDTDADPHN TRGFFF+H+GWLLVRKHP VK G LDMSD+ +P+L FQ+K+
Sbjct: 137 HHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYF 196
Query: 657 PFIGTICFIIPT 692
P + CFI+PT
Sbjct: 197 PLVILCCFILPT 208
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 215 bits (525), Expect = 3e-56
Identities = 95/167 (56%), Positives = 116/167 (69%)
Frame = +3
Query: 192 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 371
P K +IV NV F+ LH+A GLY AK T+VF+ L+ FGITAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 372 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 551
H YK P+ I LM+ N+IA QN I W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 552 LLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTICFIIPT 692
LLVRKHP VK G LD+SD++ +P+L FQ+K+ P + CFI+PT
Sbjct: 161 LLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFILPT 207
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 215 bits (525), Expect = 3e-56
Identities = 95/167 (56%), Positives = 116/167 (69%)
Frame = +3
Query: 192 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 371
P K +IV NV F+ LH+A GLY AK T+VF+ L+ FGITAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 372 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 551
H YK P+ I LM+ N+IA QN I W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 552 LLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTICFIIPT 692
LLVRKHP VK G LD+SD++ +P+L FQ+K+ P + CFI+PT
Sbjct: 161 LLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFILPT 207
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 201 bits (491), Expect = 3e-52
Identities = 90/166 (54%), Positives = 112/166 (67%)
Frame = +3
Query: 195 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 374
IK +IV NV F LHI L GLY AK AT + +L LG+ G+T GAHRLW+H
Sbjct: 34 IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93
Query: 375 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 554
YK L + LM+ NSIAFQN I W RDHR HHK+TDTDADPH+ RG FF+H+GWL
Sbjct: 94 RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
Query: 555 LVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTICFIIPT 692
LV+KH +KI G LD+SD+Y +P+L FQ+K +P +G CF +PT
Sbjct: 154 LVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALPT 199
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 201 bits (491), Expect = 3e-52
Identities = 90/166 (54%), Positives = 112/166 (67%)
Frame = +3
Query: 195 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 374
IK +IV NV F LHI L GLY AK AT + +L LG+ G+T GAHRLW+H
Sbjct: 34 IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93
Query: 375 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 554
YK L + LM+ NSIAFQN I W RDHR HHK+TDTDADPH+ RG FF+H+GWL
Sbjct: 94 RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
Query: 555 LVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTICFIIPT 692
LV+KH +KI G LD+SD+Y +P+L FQ+K +P +G CF +PT
Sbjct: 154 LVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALPT 199
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 135 EYLKDNHVDY-EKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFA 311
EY + + V Y EKL+AP+ + + + +M R YLH+ Y C+++ +++ +VF+
Sbjct: 58 EYKRKDVVLYREKLLAPEVTNLVSREQMMMHPRDQYLHVLSPY----CYSAIEVSHAVFS 113
Query: 312 IVLFFL 329
I + +
Sbjct: 114 IFAYIV 119
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 235 AIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLV 342
++Y+L + D++S+ W+ +F++LC + G +V
Sbjct: 182 SVYLLSAFADYVSIIVLSFWIVQFVVLCVAIPGAIV 217
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 486 YTDTDAD-PHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKK--YAI 656
Y D D D P T + + L R IA + L+ + L R+ KK Y +
Sbjct: 49 YVDDDDDAPKMYTPSLLEKILNYALCRGD----IANQQLEAQPVSIPGLFRYGKKFDYLL 104
Query: 657 PFIGTICFII 686
FIGTIC II
Sbjct: 105 LFIGTICAII 114
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 486 YTDTDAD-PHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKK--YAI 656
Y D D D P T + + L R IA + L+ + L R+ KK Y +
Sbjct: 49 YVDDDDDAPKMYTPSLLEKILNYALCRGD----IANQQLEAQPVSIPGLFRYGKKFDYLL 104
Query: 657 PFIGTICFII 686
FIGTIC II
Sbjct: 105 LFIGTICAII 114
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 162 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 269
YE+L + S + I V N R+S H+ G+ +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 162 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 269
YE+L + S + I V N R+S H+ G+ +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390
>AC024882-1|AAF60940.1| 369|Caenorhabditis elegans Hypothetical
protein Y9C9A.17 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 226 YVLAIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLVLQLELIV 363
+ LA ++ +Y+ I+ SPQ+ +++LL +S L + LEL+V
Sbjct: 20 FSLATNLIAIYL-VITKSPQKIGSYKYLLCSFSILSMIFALLELLV 64
>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 204 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 308
K++V ++ +HI G+YLC T+ +LA + F
Sbjct: 5 KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40
>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 204 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 308
K++V ++ +HI G+YLC T+ +LA + F
Sbjct: 5 KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.3
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +3
Query: 315 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 494
++F NFG G +W K KL ++ + NS +QN + + + H+ D
Sbjct: 168 MVFSRRNFG--GGTVMVWGAFTEKKKLEIQFVSSKMNSTDYQNVLELELSKYLRHYSRKD 225
Query: 495 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDI 614
NAT S + ++K ++ +S D++ I
Sbjct: 226 FRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNPI 265
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.3
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +3
Query: 315 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 494
++F NFG G +W K KL ++ + NS +QN + + + H+ D
Sbjct: 168 MVFSRRNFG--GGTVMVWGAFTEKKKLEIQFVSSKMNSTDYQNVLELELSKYLRHYSRKD 225
Query: 495 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDI 614
NAT S + ++K ++ +S D++ I
Sbjct: 226 FRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNPI 265
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 27.9 bits (59), Expect = 7.3
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +3
Query: 315 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 494
++F NFG G +W K KL ++ + NS +QN + + + H+ D
Sbjct: 298 MVFSRRNFG--GGTVMVWGAFTEKKKLEIQFVSSKMNSTDYQNVLELELSKYLRHYSRKD 355
Query: 495 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDI 614
NAT S + ++K ++ +S D++ I
Sbjct: 356 FRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNPI 395
>Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.4 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 GLYLCFTSAKLATS-VFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAF 437
GL TS + S VF + L + LW++N + L +++ + NS+
Sbjct: 18 GLTNALTSITVKVSFVFLATVILLSYYFAVLAIRALWNNNIFSNSTRLILIVCLLNSVVH 77
Query: 438 QNTI 449
Q+T+
Sbjct: 78 QSTM 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,547,757
Number of Sequences: 27780
Number of extensions: 327726
Number of successful extensions: 770
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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