Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0905
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 39 0.003
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 39 0.003
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 39 0.003
U70845-4|AAB09102.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.40
U40952-6|AAA81740.3| 328|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 30 1.6
Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical pr... 29 2.1
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 29 2.8
U41549-1|AAA83281.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.9
L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical p... 28 4.9
L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132904-1|CAC35832.2| 385|Caenorhabditis elegans Hypothetical ... 28 6.5
>AC024751-3|AAK21513.2| 440|Caenorhabditis elegans Hypothetical
protein Y18H1A.10 protein.
Length = 440
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +1
Query: 433 KIGEGVYGEVF--LWRARDGRARVMKIVPIAGHTKVNGEDQKDY---HEIISEIVIAMEL 597
K+GEG YGEVF +W +GR +K++P + G + H ++SE+++ EL
Sbjct: 110 KLGEGAYGEVFSTVW---NGRPVAIKVLPFENNGCFYGNQSVEIPTTHAVLSEVIVMKEL 166
Query: 598 SALRAP 615
SALR P
Sbjct: 167 SALRDP 172
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = +1
Query: 271 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KYCHKIGE 444
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 445 GVYGEVF--LWRARDGRARVMKIVPIAG-------HTKVNGEDQKDYHEIISEIVIAMEL 597
G YGEVF +W DG+ +KIVP + + E+ + ++ E+++ EL
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVPFEKDGCNRQYFGEYHSEEMQTSDVVLPEVIVMKEL 653
Query: 598 SALR 609
SALR
Sbjct: 654 SALR 657
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = +1
Query: 271 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KYCHKIGE 444
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 445 GVYGEVF--LWRARDGRARVMKIVPIAG-------HTKVNGEDQKDYHEIISEIVIAMEL 597
G YGEVF +W DG+ +KIVP + + E+ + ++ E+++ EL
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVPFEKDGCNRQYFGEYHSEEMQTSDVVLPEVIVMKEL 653
Query: 598 SALR 609
SALR
Sbjct: 654 SALR 657
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = +1
Query: 271 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KYCHKIGE 444
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 537 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 596
Query: 445 GVYGEVF--LWRARDGRARVMKIVPIAG-------HTKVNGEDQKDYHEIISEIVIAMEL 597
G YGEVF +W DG+ +KIVP + + E+ + ++ E+++ EL
Sbjct: 597 GAYGEVFSTIW---DGKPVAIKIVPFEKDGCNRQYFGEYHSEEMQTSDVVLPEVIVMKEL 653
Query: 598 SALR 609
SALR
Sbjct: 654 SALR 657
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = +1
Query: 271 LSLDDVEPEITVLGIHDTSNRV-ATARDYVLRRCNQTDAILFDECYPDALL-KYCHKIGE 444
+++ + +P I + D ++ + + +L Q ++ +D AL + K+GE
Sbjct: 245 MTIHNEDPSILPFYLEDLTSEIDPSPMMQLLHVVGQKESKTWDSLPKSALDGRRVKKLGE 304
Query: 445 GVYGEVF--LWRARDGRARVMKIVPIAG-------HTKVNGEDQKDYHEIISEIVIAMEL 597
G YGEVF +W DG+ +KIVP + + E+ + ++ E+++ EL
Sbjct: 305 GAYGEVFSTIW---DGKPVAIKIVPFEKDGCNRQYFGEYHSEEMQTSDVVLPEVIVMKEL 361
Query: 598 SALR 609
SALR
Sbjct: 362 SALR 365
>U70845-4|AAB09102.1| 340|Caenorhabditis elegans Hypothetical
protein F22H10.5 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 433 KIGEGVYGEVFLWRARDGRARVMKIVPI--AGHTKVNGEDQKDYHEIISEIVIAMELSAL 606
KIGEG Y E F + ++ VMK++P + + GE + +I+E+ I LSAL
Sbjct: 98 KIGEGCYAEAFS-TIFNNQSVVMKVLPCRDISNGEKCGEHTQGIDAVIAELAILKSLSAL 156
>U40952-6|AAA81740.3| 328|Caenorhabditis elegans Hypothetical
protein C03B1.5 protein.
Length = 328
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 433 KIGEGVYGEVFLWRARDGRARVMKIVPIAGHTKVNGEDQKDYHEIISEI 579
KIG G +GEV L + AR +I+ KV + DYH+II E+
Sbjct: 30 KIGSGAFGEVMLVHSDRLDARGEQILHNEFALKVIRFPECDYHKIIREV 78
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical protein
F54C8.3 protein.
Length = 1027
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 199 MHLTLQYTGFLSDDCDDTIVGLSKLSLDDVEPEITVLGIHDTSNRVATARDYVLRR 366
+H T+Q +L DD SK+++ D++PE+ + ++ T RDY RR
Sbjct: 933 IHPTIQLAAYLHDDG-------SKITIGDMKPEVPPIADYEEKTVRKTFRDYQRRR 981
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 199 MHLTLQYTGFLSDDCDDTIVGLSKLSLDDVEPEITVLGIHDTSNRVATARDYVLRR 366
+H T+Q +L DD SK+++ D++PE+ + ++ T RDY RR
Sbjct: 933 IHPTIQLAAYLHDDG-------SKITIGDMKPEVPPIADYEEKTVRKTFRDYQRRR 981
>Z49131-2|CAA88975.1| 321|Caenorhabditis elegans Hypothetical
protein ZC373.3 protein.
Length = 321
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 421 KYCHKIGEGVYGEVFLWRARDG-RARVMKIVPIAGHTKVNGEDQKD 555
K HK+G G +GEV W+A D V KIV I + V G +D
Sbjct: 37 KLIHKVGSGSFGEV--WQATDKLEGNVAKIVKII-NKYVGGSGPRD 79
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 278 SMMWNRRSPF*V-YMILRIVLLQLEITCYVDAIKR 379
S +W +R F + Y++L IVL+ LEI C V + R
Sbjct: 91 SSVWPKRKGFMITYLVLIIVLVSLEIGCGVAVLVR 125
>U41549-1|AAA83281.1| 299|Caenorhabditis elegans Hypothetical
protein F22F1.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 433 KIGEGVYGEVFLWR-ARDGRARVMKIVPIAGHTKVNG 540
K+GEG YG+V+ R R+ + V+K++ H ++NG
Sbjct: 16 KLGEGSYGDVYFCRDERNNKWSVIKLI----HKEING 48
>L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical
protein ZK353.1a protein.
Length = 355
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 399 MLSRRTFEILSQDWRRCVRGSISLACSRWQXXXXXXXXXCWSYQG-QWRRPKGLSRDYLG 575
+L+ ++ +WRR V GSI LA W C + L R +L
Sbjct: 217 LLNYAEMDLCPSNWRRVVLGSIMLASKVWDDQAVWNVDYCQILRDTNVDDMNELERRFL- 275
Query: 576 NCDCYGIERPARSHSRY 626
C + IE P+ +++Y
Sbjct: 276 ECLDFNIEVPSSVYAKY 292
>L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical
protein ZK353.1b protein.
Length = 357
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 399 MLSRRTFEILSQDWRRCVRGSISLACSRWQXXXXXXXXXCWSYQG-QWRRPKGLSRDYLG 575
+L+ ++ +WRR V GSI LA W C + L R +L
Sbjct: 219 LLNYAEMDLCPSNWRRVVLGSIMLASKVWDDQAVWNVDYCQILRDTNVDDMNELERRFL- 277
Query: 576 NCDCYGIERPARSHSRY 626
C + IE P+ +++Y
Sbjct: 278 ECLDFNIEVPSSVYAKY 294
>Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 241 CDDTIVGLSKLSLDDVEPEITVLGIHDTSN-RVATARDYV 357
C D +GLS LS PEI VL H++++ R+ +A D V
Sbjct: 49 CHDVPLGLSNLSTITNIPEIVVLREHNSNDIRMTSALDDV 88
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 203 CMHLALDTFNGTKNRQKKPIIPLRIMAVTQI 111
C HL +F+GT N KKP+I A+ ++
Sbjct: 199 CYHLRYRSFDGTCNNLKKPMIGSAFTALMRL 229
>AL132904-1|CAC35832.2| 385|Caenorhabditis elegans Hypothetical
protein Y111B2A.1 protein.
Length = 385
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 436 IGEGVYGEVFLWRARDGRARVMKIVPIAGHTKVNGEDQKDYHEIISEIVIA 588
+GEGV+G VF + + + + AGHT+ ED EI+ + A
Sbjct: 56 LGEGVFGTVFEVADAEKKKKFALKLFKAGHTQFGCEDWVRESEIMKSVAAA 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,948
Number of Sequences: 27780
Number of extensions: 307298
Number of successful extensions: 847
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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