Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0899
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC...    31   1.4  
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB...    31   1.4  
AY058304-1|AAL13533.1| 1097|Drosophila melanogaster GH06573p pro...    29   4.2  
AE014135-76|AAS64609.1| 1150|Drosophila melanogaster CG2052-PA, ...    29   4.2  
AE014135-75|AAF59348.3| 1140|Drosophila melanogaster CG2052-PB, ...    29   4.2  

>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
           isoform C protein.
          Length = 2148

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -2

Query: 185 GHH--SHYQYKSNRLPTVSTYEHP*PHNTLHKILKYNHTSPFS 63
           GHH   H Q+  +  P  S + HP PH   H      H+ P S
Sbjct: 125 GHHYAHHQQHTHHHAPPHSHHPHPHPHGHPHSYPHLRHSQPAS 167


>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
           isoform B protein.
          Length = 2196

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -2

Query: 185 GHH--SHYQYKSNRLPTVSTYEHP*PHNTLHKILKYNHTSPFS 63
           GHH   H Q+  +  P  S + HP PH   H      H+ P S
Sbjct: 125 GHHYAHHQQHTHHHAPPHSHHPHPHPHGHPHSYPHLRHSQPAS 167


>AY058304-1|AAL13533.1| 1097|Drosophila melanogaster GH06573p protein.
          Length = 1097

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -2

Query: 182  HHSHYQYKSN--RLPTVSTYEHP*PHNTLHKILKYNHTSPFSNFKKNH-EGICRNN 24
            HH H+ + SN  +     T +H  PH   H+   ++HTSP +  + +  E I R++
Sbjct: 981  HHHHHHHTSNYPQHAVTPTNQHTHPHPQTHQ-TAHHHTSPETALRMHQAEAILRSH 1035


>AE014135-76|AAS64609.1| 1150|Drosophila melanogaster CG2052-PA,
            isoform A protein.
          Length = 1150

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -2

Query: 182  HHSHYQYKSN--RLPTVSTYEHP*PHNTLHKILKYNHTSPFSNFKKNH-EGICRNN 24
            HH H+ + SN  +     T +H  PH   H+   ++HTSP +  + +  E I R++
Sbjct: 1034 HHHHHHHTSNYPQHAVTPTNQHTHPHPQTHQ-TAHHHTSPETALRMHQAEAILRSH 1088


>AE014135-75|AAF59348.3| 1140|Drosophila melanogaster CG2052-PB,
            isoform B protein.
          Length = 1140

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -2

Query: 182  HHSHYQYKSN--RLPTVSTYEHP*PHNTLHKILKYNHTSPFSNFKKNH-EGICRNN 24
            HH H+ + SN  +     T +H  PH   H+   ++HTSP +  + +  E I R++
Sbjct: 1024 HHHHHHHTSNYPQHAVTPTNQHTHPHPQTHQ-TAHHHTSPETALRMHQAEAILRSH 1078


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,033,842
Number of Sequences: 53049
Number of extensions: 526320
Number of successful extensions: 1680
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)