Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0897
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223554-1|BAD97274.1| 831|Homo sapiens ATPase, H+ transporting... 109 6e-24
Z71460-1|CAA96077.1| 831|Homo sapiens vacuolar-type H(+)-ATPase... 105 6e-23
L78933-1|AAL77442.1| 831|Homo sapiens vacuolar-type H(+)-ATPase... 105 6e-23
BC032398-1|AAH32398.1| 837|Homo sapiens ATP6V0A1 protein protein. 105 1e-22
BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting... 104 2e-22
BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting... 104 2e-22
AK055789-1|BAB71014.1| 513|Homo sapiens protein ( Homo sapiens ... 104 2e-22
AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 11... 104 2e-22
U45285-1|AAA97878.1| 829|Homo sapiens specific 116-kDa vacuolar... 93 4e-19
BC032465-1|AAH32465.1| 830|Homo sapiens T-cell, immune regulato... 93 4e-19
BC018133-1|AAH18133.1| 830|Homo sapiens T-cell, immune regulato... 93 4e-19
AF033033-1|AAD31081.2| 614|Homo sapiens TIRC7 protein protein. 93 4e-19
AF025374-1|AAC35742.1| 614|Homo sapiens TIRC7 protein. 93 4e-19
BC068531-1|AAH68531.1| 856|Homo sapiens ATPase, H+ transporting... 90 4e-18
AF112972-1|AAD04632.1| 856|Homo sapiens TJ6 protein. 90 4e-18
AL137683-1|CAB70874.1| 163|Homo sapiens hypothetical protein pr... 87 3e-17
AF497545-1|AAM18704.1| 61|Homo sapiens T-cell immune regulator... 66 5e-11
AY548971-1|AAS59838.1| 44|Homo sapiens T-cell immune regulator... 36 0.067
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 32 1.1
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 32 1.1
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 32 1.1
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 29 7.7
AF132607-1|AAD29046.1| 1084|Homo sapiens histone deacetylase 4 p... 29 7.7
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 29 7.7
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 29 7.7
AC017028-1|AAX93070.1| 1052|Homo sapiens unknown protein. 29 7.7
AB006626-1|BAA22957.2| 1097|Homo sapiens KIAA0288 protein protein. 29 7.7
>AK223554-1|BAD97274.1| 831|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a isoform 1 variant protein.
Length = 831
Score = 109 bits (261), Expect = 6e-24
Identities = 60/146 (41%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRA----------RQGHQPVXXXX 194
++SGQ IQ V+VALLCVP ML KP + R+ +R R G+ P
Sbjct: 628 LYSGQKGIQCFLVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDA 687
Query: 195 XXXXXXXXPVPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAE 374
+ + + + +HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+E
Sbjct: 688 EIIQHDQLSTHSEDADEFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSE 747
Query: 375 VAWNMLLRKGLMSNDYQGGIFLYVVF 452
V W M++ GL GG+ L+ F
Sbjct: 748 VLWTMVIHIGLSVKSLAGGLVLFFFF 773
>Z71460-1|CAA96077.1| 831|Homo sapiens vacuolar-type H(+)-ATPase 115
kDa subunit protein.
Length = 831
Score = 105 bits (253), Expect = 6e-23
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRA----------RQGHQPVXXXX 194
++SGQ IQ V+VALLCVP ML KP + R+ +R R G+ P
Sbjct: 628 LYSGQKGIQCFLVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDA 687
Query: 195 XXXXXXXXPVPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAE 374
+ + + + +HQAIHTIE+ LG +S+TASYLRLWALSLAHA ++E
Sbjct: 688 EIIQHDQLSTHSEDADEFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAHVSE 747
Query: 375 VAWNMLLRKGLMSNDYQGGIFLYVVF 452
V W M++ GL GG+ L+ F
Sbjct: 748 VLWTMVIHIGLSVKSLAGGLVLFFFF 773
>L78933-1|AAL77442.1| 831|Homo sapiens vacuolar-type H(+)-ATPase
protein.
Length = 831
Score = 105 bits (253), Expect = 6e-23
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRA----------RQGHQPVXXXX 194
++SGQ IQ V+VALLCVP ML KP + R+ +R R G+ P
Sbjct: 628 LYSGQKGIQCFLVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDA 687
Query: 195 XXXXXXXXPVPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAE 374
+ + + + +HQAIHTIE+ LG +S+TASYLRLWALSLAHA ++E
Sbjct: 688 EIIQHDQLSTHSEDADEFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAHVSE 747
Query: 375 VAWNMLLRKGLMSNDYQGGIFLYVVF 452
V W M++ GL GG+ L+ F
Sbjct: 748 VLWTMVIHIGLSVKSLAGGLVLFFFF 773
>BC032398-1|AAH32398.1| 837|Homo sapiens ATP6V0A1 protein protein.
Length = 837
Score = 105 bits (251), Expect = 1e-22
Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 16/152 (10%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRA----------RQGHQPVXXXX 194
++SGQ IQ V+VALLCVP ML KP + R+ +R R G+ P
Sbjct: 628 LYSGQKGIQCFLVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDA 687
Query: 195 XXXXXXXXPVPASGHHDEEITEVF------IHQAIHTIEFVLGSVSHTASYLRLWALSLA 356
+ + EVF +HQAIHTIE+ LG +S+TASYLRLWALSLA
Sbjct: 688 EIIQHDQLSTHSEDADEPSEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLA 747
Query: 357 HAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
HAQL+EV W M++ GL GG+ L+ F
Sbjct: 748 HAQLSEVLWTMVIHIGLSVKSLAGGLVLFFFF 779
>BC109305-1|AAI09306.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 104 bits (249), Expect = 2e-22
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPV 224
++ Q +Q FV++AL+ VP ML KP FI+R ++++ +
Sbjct: 632 LYKHQQEVQSFFVVMALISVPWMLLIKP-FILRASHRKSQLQASRIQEDATENIEGDSSS 690
Query: 225 PAS--------------GHHDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLA 356
P+S H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLA
Sbjct: 691 PSSRSGQRTSADTHGALDDHGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLA 750
Query: 357 HAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFA 455
HAQL+EV W M++ GL + + G + ++++FA
Sbjct: 751 HAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFA 783
>BC109304-1|AAI09305.1| 840|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a4 protein.
Length = 840
Score = 104 bits (249), Expect = 2e-22
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPV 224
++ Q +Q FV++AL+ VP ML KP FI+R ++++ +
Sbjct: 632 LYKHQQEVQSFFVVMALISVPWMLLIKP-FILRASHRKSQLQASRIQEDATENIEGDSSS 690
Query: 225 PAS--------------GHHDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLA 356
P+S H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLA
Sbjct: 691 PSSRSGQRTSADTHGALDDHGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLA 750
Query: 357 HAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFA 455
HAQL+EV W M++ GL + + G + ++++FA
Sbjct: 751 HAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFA 783
>AK055789-1|BAB71014.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ31227 fis, clone KIDNE2004411, highly similar to
Homo sapiens vacuolar proton pump 116 kDa accessory
subunit ).
Length = 513
Score = 104 bits (249), Expect = 2e-22
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPV 224
++ Q +Q FV++AL+ VP ML KP FI+R ++++ +
Sbjct: 305 LYKHQQEVQSFFVVMALISVPWMLLIKP-FILRASHRKSQLQASRIQEDATENIEGDSSS 363
Query: 225 PAS--------------GHHDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLA 356
P+S H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLA
Sbjct: 364 PSSRSGQRTSADTHGALDDHGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLA 423
Query: 357 HAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFA 455
HAQL+EV W M++ GL + + G + ++++FA
Sbjct: 424 HAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFA 456
>AF245517-1|AAG11415.1| 840|Homo sapiens vacuolar proton pump 116 kDa
accessory subunit protein.
Length = 840
Score = 104 bits (249), Expect = 2e-22
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPV 224
++ Q +Q FV++AL+ VP ML KP FI+R ++++ +
Sbjct: 632 LYKHQQEVQSFFVVMALISVPWMLLIKP-FILRASHRKSQLQASRIQEDATENIEGDSSS 690
Query: 225 PAS--------------GHHDEEIT--EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLA 356
P+S H EE +VF+HQAIHTIE+ LG +S+TASYLRLWALSLA
Sbjct: 691 PSSRSGQRTSADTHGALDDHGEEFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLA 750
Query: 357 HAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFA 455
HAQL+EV W M++ GL + + G + ++++FA
Sbjct: 751 HAQLSEVLWTMVMNSGLQTRGWGGIVGVFIIFA 783
>U45285-1|AAA97878.1| 829|Homo sapiens specific 116-kDa vacuolar
proton pump subunit protein.
Length = 829
Score = 93.1 bits (221), Expect = 4e-19
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQ--GHQPVXXXXXXXXXXXX 218
++ Q +Q V++AL VPI+L G P ++ ++R R+ +
Sbjct: 624 LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDA 683
Query: 219 PV--------PASGHHDEEI-----TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAH 359
V A G DEE +EV +HQAIHTIEF LG VS+TASYLRLWALSLAH
Sbjct: 684 SVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAH 743
Query: 360 AQLAEVAWNMLLRKGL 407
AQL+EV W M++R GL
Sbjct: 744 AQLSEVLWAMVMRIGL 759
>BC032465-1|AAH32465.1| 830|Homo sapiens T-cell, immune regulator 1,
ATPase, H+ transporting, lysosomal V0 subunit A3 protein.
Length = 830
Score = 93.1 bits (221), Expect = 4e-19
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQ--GHQPVXXXXXXXXXXXX 218
++ Q +Q V++AL VPI+L G P ++ ++R R+ +
Sbjct: 625 LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDA 684
Query: 219 PV--------PASGHHDEEI-----TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAH 359
V A G DEE +EV +HQAIHTIEF LG VS+TASYLRLWALSLAH
Sbjct: 685 SVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAH 744
Query: 360 AQLAEVAWNMLLRKGL 407
AQL+EV W M++R GL
Sbjct: 745 AQLSEVLWAMVMRIGL 760
>BC018133-1|AAH18133.1| 830|Homo sapiens T-cell, immune regulator 1,
ATPase, H+ transporting, lysosomal V0 subunit A3 protein.
Length = 830
Score = 93.1 bits (221), Expect = 4e-19
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQ--GHQPVXXXXXXXXXXXX 218
++ Q +Q V++AL VPI+L G P ++ ++R R+ +
Sbjct: 625 LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDA 684
Query: 219 PV--------PASGHHDEEI-----TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAH 359
V A G DEE +EV +HQAIHTIEF LG VS+TASYLRLWALSLAH
Sbjct: 685 SVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAH 744
Query: 360 AQLAEVAWNMLLRKGL 407
AQL+EV W M++R GL
Sbjct: 745 AQLSEVLWAMVMRIGL 760
>AF033033-1|AAD31081.2| 614|Homo sapiens TIRC7 protein protein.
Length = 614
Score = 93.1 bits (221), Expect = 4e-19
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQ--GHQPVXXXXXXXXXXXX 218
++ Q +Q V++AL VPI+L G P ++ ++R R+ +
Sbjct: 409 LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDA 468
Query: 219 PV--------PASGHHDEEI-----TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAH 359
V A G DEE +EV +HQAIHTIEF LG VS+TASYLRLWALSLAH
Sbjct: 469 SVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAH 528
Query: 360 AQLAEVAWNMLLRKGL 407
AQL+EV W M++R GL
Sbjct: 529 AQLSEVLWAMVMRIGL 544
>AF025374-1|AAC35742.1| 614|Homo sapiens TIRC7 protein.
Length = 614
Score = 93.1 bits (221), Expect = 4e-19
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 15/136 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQ--GHQPVXXXXXXXXXXXX 218
++ Q +Q V++AL VPI+L G P ++ ++R R+ +
Sbjct: 409 LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDA 468
Query: 219 PV--------PASGHHDEEI-----TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAH 359
V A G DEE +EV +HQAIHTIEF LG VS+TASYLRLWALSLAH
Sbjct: 469 SVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAH 528
Query: 360 AQLAEVAWNMLLRKGL 407
AQL+EV W M++R GL
Sbjct: 529 AQLSEVLWAMVMRIGL 544
>BC068531-1|AAH68531.1| 856|Homo sapiens ATPase, H+ transporting,
lysosomal V0 subunit a2 protein.
Length = 856
Score = 89.8 bits (213), Expect = 4e-18
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRA-----RQGHQPVXXXXXXXXX 209
+++GQ ++Q++ ++V L VP++ GKP F++ R+ R G+ +
Sbjct: 641 LYTGQEYVQRVLLVVTALSVPVLFLGKPLFLLWLHNGRSCFGVNRSGYTLIRKDSEEEVS 700
Query: 210 XXXPVPAS-GHHDEE------------ITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
G+H E E+ + Q IH+IE+ LG +S+TASYLRLWALS
Sbjct: 701 LLGSQDIEEGNHQVEDGCREMACEEFNFGEILMTQVIHSIEYCLGCISNTASYLRLWALS 760
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFA 455
LAHAQL++V W ML+R GL + G + L V A
Sbjct: 761 LAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVIA 795
>AF112972-1|AAD04632.1| 856|Homo sapiens TJ6 protein.
Length = 856
Score = 89.8 bits (213), Expect = 4e-18
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Frame = +3
Query: 45 MFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRA-----RQGHQPVXXXXXXXXX 209
+++GQ ++Q++ ++V L VP++ GKP F++ R+ R G+ +
Sbjct: 641 LYTGQEYVQRVLLVVTALSVPVLFLGKPLFLLWLHNGRSCFGVNRSGYTLIRKDSEEEVS 700
Query: 210 XXXPVPAS-GHHDEE------------ITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
G+H E E+ + Q IH+IE+ LG +S+TASYLRLWALS
Sbjct: 701 LLGSQDIEEGNHQVEDGCREMACEEFNFGEILMTQVIHSIEYCLGCISNTASYLRLWALS 760
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFA 455
LAHAQL++V W ML+R GL + G + L V A
Sbjct: 761 LAHAQLSDVLWAMLMRVGLRVDTTYGVLLLLPVIA 795
>AL137683-1|CAB70874.1| 163|Homo sapiens hypothetical protein
protein.
Length = 163
Score = 87.0 bits (206), Expect = 3e-17
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +3
Query: 258 EVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRKGLMSNDYQGGIF 437
+ +HQAIHTIE+ LG +S+TASYLRLWALSLAHAQL+EV W M++ GL GG+
Sbjct: 41 DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLSVKSLAGGLV 100
Query: 438 LYVVF 452
L+ F
Sbjct: 101 LFFFF 105
>AF497545-1|AAM18704.1| 61|Homo sapiens T-cell immune regulator 1
transcript variant 3 protein.
Length = 61
Score = 66.1 bits (154), Expect = 5e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 255 TEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQ 365
+EV +HQAIHTIEF LG VS+TASYLRLWALSLAHA+
Sbjct: 11 SEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAR 47
>AY548971-1|AAS59838.1| 44|Homo sapiens T-cell immune regulator 1
transcript variant 8 protein.
Length = 44
Score = 35.9 bits (79), Expect = 0.067
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 242 RRRDHRGLHSPGHPHHRVRVG 304
R R RG H+PGHPHHRV G
Sbjct: 4 RARPLRGAHAPGHPHHRVLPG 24
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 202 PFSALPSTGW*PCLA--RCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHC 29
PF AL C C C +++Y + G +S C +CP M+ C
Sbjct: 245 PFVALCEKTLCECAGGLECACPALLEYARTCAQEGMVLYGWTDHSACSPVCPAGMEYRQC 304
Query: 28 AAPAAR 11
+P AR
Sbjct: 305 VSPCAR 310
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
fragment (5'terminus) for von Willebrand factor (vWF).
).
Length = 1400
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 202 PFSALPSTGW*PCLA--RCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHC 29
PF AL C C C +++Y + G +S C +CP M+ C
Sbjct: 245 PFVALCEKTLCECAGGLECACPALLEYARTCAQEGMVLYGWTDHSACSPVCPAGMEYRQC 304
Query: 28 AAPAAR 11
+P AR
Sbjct: 305 VSPCAR 310
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
protein.
Length = 2813
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 202 PFSALPSTGW*PCLA--RCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHC 29
PF AL C C C +++Y + G +S C +CP M+ C
Sbjct: 245 PFVALCEKTLCECAGGLECACPALLEYARTCAQEGMVLYGWTDHSACSPVCPAGMEYRQC 304
Query: 28 AAPAAR 11
+P AR
Sbjct: 305 VSPCAR 310
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 163 LARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCAAPAA 14
L C C + +Y + G + FC CP NM+ C +P A
Sbjct: 303 LLSCVCHTLAEYSRQCTHAGGLPQDWRGPDFCPQKCPNNMQYHECRSPCA 352
>AF132607-1|AAD29046.1| 1084|Homo sapiens histone deacetylase 4
protein.
Length = 1084
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
++ + E H Q S HE L+EH+ + E++A++
Sbjct: 87 QILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMK 122
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 163 LARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCAAPAA 14
L C C + +Y + G + FC CP NM+ C +P A
Sbjct: 305 LLSCVCHTLAEYSRQCTHAGGLPQDWRGPDFCPQKCPNNMQYHECRSPCA 354
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 163 LARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCAAPAA 14
L C C + +Y + G + FC CP NM+ C +P A
Sbjct: 303 LLSCVCHTLAEYSRQCTHAGGLPQDWRGPDFCPQKCPNNMQYHECRSPCA 352
>AC017028-1|AAX93070.1| 1052|Homo sapiens unknown protein.
Length = 1052
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
++ + E H Q S HE L+EH+ + E++A++
Sbjct: 55 QILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMK 90
>AB006626-1|BAA22957.2| 1097|Homo sapiens KIAA0288 protein protein.
Length = 1097
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
++ + E H Q S HE L+EH+ + E++A++
Sbjct: 100 QILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMK 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,924,879
Number of Sequences: 237096
Number of extensions: 1014057
Number of successful extensions: 3073
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3065
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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