Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0897
(458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 140 6e-34
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 140 6e-34
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 140 6e-34
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 140 6e-34
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 140 6e-34
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 140 6e-34
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 122 1e-28
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 122 1e-28
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 122 1e-28
U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpa... 120 5e-28
AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein. 120 5e-28
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 101 2e-22
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 101 2e-22
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 99 1e-21
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 99 1e-21
Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical p... 27 6.6
Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical pr... 27 6.6
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 27 6.6
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 6.6
AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B regula... 27 6.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 8.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 8.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 8.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 8.7
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 8.7
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 8.7
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 8.7
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 8.7
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical protein
ZK637.8e protein.
Length = 888
Score = 140 bits (338), Expect = 6e-34
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPVP 227
+ GQ F + +FV+VA+ CVP+MLFGKPYF+ +E+K+R GH+ + V
Sbjct: 679 YPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERREGGHRQLSVRADINQDDAEVVH 738
Query: 228 A-------SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQL 368
A SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALSLAHAQL
Sbjct: 739 APEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQL 798
Query: 369 AEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
++V W M+ R + + Y G I Y++F
Sbjct: 799 SDVLWTMVFRNAFVLDGYTGAIATYILF 826
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical protein
ZK637.8d protein.
Length = 899
Score = 140 bits (338), Expect = 6e-34
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPVP 227
+ GQ F + +FV+VA+ CVP+MLFGKPYF+ +E+K+R GH+ + V
Sbjct: 690 YPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERREGGHRQLSVRADINQDDAEVVH 749
Query: 228 A-------SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQL 368
A SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALSLAHAQL
Sbjct: 750 APEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQL 809
Query: 369 AEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
++V W M+ R + + Y G I Y++F
Sbjct: 810 SDVLWTMVFRNAFVLDGYTGAIATYILF 837
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical protein
ZK637.8b protein.
Length = 883
Score = 140 bits (338), Expect = 6e-34
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPVP 227
+ GQ F + +FV+VA+ CVP+MLFGKPYF+ +E+K+R GH+ + V
Sbjct: 674 YPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERREGGHRQLSVRADINQDDAEVVH 733
Query: 228 A-------SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQL 368
A SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALSLAHAQL
Sbjct: 734 APEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQL 793
Query: 369 AEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
++V W M+ R + + Y G I Y++F
Sbjct: 794 SDVLWTMVFRNAFVLDGYTGAIATYILF 821
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 140 bits (338), Expect = 6e-34
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPVP 227
+ GQ F + +FV+VA+ CVP+MLFGKPYF+ +E+K+R GH+ + V
Sbjct: 679 YPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERREGGHRQLSVRADINQDDAEVVH 738
Query: 228 A-------SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQL 368
A SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALSLAHAQL
Sbjct: 739 APEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQL 798
Query: 369 AEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
++V W M+ R + + Y G I Y++F
Sbjct: 799 SDVLWTMVFRNAFVLDGYTGAIATYILF 826
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 140 bits (338), Expect = 6e-34
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPVP 227
+ GQ F + +FV+VA+ CVP+MLFGKPYF+ +E+K+R GH+ + V
Sbjct: 690 YPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERREGGHRQLSVRADINQDDAEVVH 749
Query: 228 A-------SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQL 368
A SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALSLAHAQL
Sbjct: 750 APEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQL 809
Query: 369 AEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
++V W M+ R + + Y G I Y++F
Sbjct: 810 SDVLWTMVFRNAFVLDGYTGAIATYILF 837
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 140 bits (338), Expect = 6e-34
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPVP 227
+ GQ F + +FV+VA+ CVP+MLFGKPYF+ +E+K+R GH+ + V
Sbjct: 674 YPGQSFFETIFVLVAIACVPVMLFGKPYFLWKEEKERREGGHRQLSVRADINQDDAEVVH 733
Query: 228 A-------SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQL 368
A SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALSLAHAQL
Sbjct: 734 APEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALSLAHAQL 793
Query: 369 AEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
++V W M+ R + + Y G I Y++F
Sbjct: 794 SDVLWTMVFRNAFVLDGYTGAIATYILF 821
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical protein
ZK637.8f protein.
Length = 889
Score = 122 bits (294), Expect = 1e-28
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 19/154 (12%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG--------HQPVXXXXXXX 203
+ GQ I+ + V++AL+ VPIMLF KPYF+ R KQ++R HQ V
Sbjct: 674 YPGQATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQD 733
Query: 204 XXXXXPVPA-----SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
P SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALS
Sbjct: 734 DAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALS 793
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
LAHAQL++V W M+ R + + Y G I Y++F
Sbjct: 794 LAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILF 827
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical protein
ZK637.8c protein.
Length = 894
Score = 122 bits (294), Expect = 1e-28
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 19/154 (12%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG--------HQPVXXXXXXX 203
+ GQ I+ + V++AL+ VPIMLF KPYF+ R KQ++R HQ V
Sbjct: 679 YPGQATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQD 738
Query: 204 XXXXXPVPA-----SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
P SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALS
Sbjct: 739 DAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALS 798
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
LAHAQL++V W M+ R + + Y G I Y++F
Sbjct: 799 LAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILF 832
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical protein
ZK637.8a protein.
Length = 905
Score = 122 bits (294), Expect = 1e-28
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 19/154 (12%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG--------HQPVXXXXXXX 203
+ GQ I+ + V++AL+ VPIMLF KPYF+ R KQ++R HQ V
Sbjct: 690 YPGQATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQD 749
Query: 204 XXXXXPVPA-----SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
P SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALS
Sbjct: 750 DAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALS 809
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
LAHAQL++V W M+ R + + Y G I Y++F
Sbjct: 810 LAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILF 843
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 122 bits (294), Expect = 1e-28
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 19/154 (12%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG--------HQPVXXXXXXX 203
+ GQ I+ + V++AL+ VPIMLF KPYF+ R KQ++R HQ V
Sbjct: 674 YPGQATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQD 733
Query: 204 XXXXXPVPA-----SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
P SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALS
Sbjct: 734 DAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALS 793
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
LAHAQL++V W M+ R + + Y G I Y++F
Sbjct: 794 LAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILF 827
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 122 bits (294), Expect = 1e-28
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 19/154 (12%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG--------HQPVXXXXXXX 203
+ GQ I+ + V++AL+ VPIMLF KPYF+ R KQ++R HQ V
Sbjct: 679 YPGQATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQD 738
Query: 204 XXXXXPVPA-----SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
P SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALS
Sbjct: 739 DAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALS 798
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
LAHAQL++V W M+ R + + Y G I Y++F
Sbjct: 799 LAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILF 832
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 122 bits (294), Expect = 1e-28
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 19/154 (12%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG--------HQPVXXXXXXX 203
+ GQ I+ + V++AL+ VPIMLF KPYF+ R KQ++R HQ V
Sbjct: 690 YPGQATIEIILVVLALVQVPIMLFAKPYFLYRRDKQQSRYSTLTAESNQHQSVRADINQD 749
Query: 204 XXXXXPVPA-----SGH---HDE---EITEVFIHQAIHTIEFVLGSVSHTASYLRLWALS 350
P SGH H + E+ +V ++QAIHTIEFVLG VSHTASYLRLWALS
Sbjct: 750 DAEVVHAPEQTPKPSGHGHGHGDGPLEMGDVMVYQAIHTIEFVLGCVSHTASYLRLWALS 809
Query: 351 LAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVF 452
LAHAQL++V W M+ R + + Y G I Y++F
Sbjct: 810 LAHAQLSDVLWTMVFRNAFVLDGYTGAIATYILF 843
>U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpase
protein 5 protein.
Length = 873
Score = 120 bits (289), Expect = 5e-28
Identities = 66/151 (43%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPV- 224
+ GQ I+ + V++A++CVP+MLFGKP + +QK++A++ H V
Sbjct: 665 YPGQSVIEMILVVIAVICVPVMLFGKPIHHVMQQKKKAKELHGNATVRANVVSDSSEIVL 724
Query: 225 --------------PASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHA 362
GH DE ++ +HQAIHTIE+VLG VSHTASYLRLWALSLAHA
Sbjct: 725 NGGSKKEGAAHEEHGHGGHEDESFGDIMVHQAIHTIEYVLGCVSHTASYLRLWALSLAHA 784
Query: 363 QLAEVAWNML-LRKGLMSNDYQGGIFLYVVF 452
QL+EV W+M+ + GL + G I +YVVF
Sbjct: 785 QLSEVLWHMVFVTGGLGISGTAGFIAVYVVF 815
>AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein.
Length = 873
Score = 120 bits (289), Expect = 5e-28
Identities = 66/151 (43%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQGHQPVXXXXXXXXXXXXPV- 224
+ GQ I+ + V++A++CVP+MLFGKP + +QK++A++ H V
Sbjct: 665 YPGQSVIEMILVVIAVICVPVMLFGKPIHHVMQQKKKAKELHGNATVRANVVSDSSEIVL 724
Query: 225 --------------PASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHA 362
GH DE ++ +HQAIHTIE+VLG VSHTASYLRLWALSLAHA
Sbjct: 725 NGGSKKEGAAHEEHGHGGHEDESFGDIMVHQAIHTIEYVLGCVSHTASYLRLWALSLAHA 784
Query: 363 QLAEVAWNML-LRKGLMSNDYQGGIFLYVVF 452
QL+EV W+M+ + GL + G I +YVVF
Sbjct: 785 QLSEVLWHMVFVTGGLGISGTAGFIAVYVVF 815
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical protein
C26H9A.1 protein.
Length = 966
Score = 101 bits (243), Expect = 2e-22
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 23/150 (15%)
Frame = +3
Query: 42 FMFSGQMFIQKLFVIVALLCVPIMLFGKPYFIM----REQKQRARQGHQPVXXXXXXXXX 209
+ + Q ++ + + ++L C+PIMLFGKP ++ + K + + + +
Sbjct: 722 YWYPNQRLVETILISISLACIPIMLFGKPLWVRFVTSKRHKLQENKSLKSLRRNGTTVSA 781
Query: 210 XXXPVPASG---HHDEEI----------------TEVFIHQAIHTIEFVLGSVSHTASYL 332
PV +G D E+ +++F+HQAIHTIEFVLG VSHTASYL
Sbjct: 782 PTSPVVDAGPPRFEDAELLLADELDIGEDIHHSLSDIFVHQAIHTIEFVLGCVSHTASYL 841
Query: 333 RLWALSLAHAQLAEVAWNMLLRKGLMSNDY 422
RLWALSLAHAQL+EV W+M+L +G+ + D+
Sbjct: 842 RLWALSLAHAQLSEVMWHMVLIQGIHTVDH 871
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 101 bits (243), Expect = 2e-22
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 23/150 (15%)
Frame = +3
Query: 42 FMFSGQMFIQKLFVIVALLCVPIMLFGKPYFIM----REQKQRARQGHQPVXXXXXXXXX 209
+ + Q ++ + + ++L C+PIMLFGKP ++ + K + + + +
Sbjct: 722 YWYPNQRLVETILISISLACIPIMLFGKPLWVRFVTSKRHKLQENKSLKSLRRNGTTVSA 781
Query: 210 XXXPVPASG---HHDEEI----------------TEVFIHQAIHTIEFVLGSVSHTASYL 332
PV +G D E+ +++F+HQAIHTIEFVLG VSHTASYL
Sbjct: 782 PTSPVVDAGPPRFEDAELLLADELDIGEDIHHSLSDIFVHQAIHTIEFVLGCVSHTASYL 841
Query: 333 RLWALSLAHAQLAEVAWNMLLRKGLMSNDY 422
RLWALSLAHAQL+EV W+M+L +G+ + D+
Sbjct: 842 RLWALSLAHAQLSEVMWHMVLIQGIHTVDH 871
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical protein
VW02B12L.1 protein.
Length = 865
Score = 99.1 bits (236), Expect = 1e-21
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRAR--QGHQPVXXXXXXXXXXXXP 221
+ Q ++ + +++A++ VP+ML KP++I + GH P
Sbjct: 685 YPNQSLVELILLLIAVVSVPVMLLVKPFYIRWRHSRGLHIDLGHGP-------------- 730
Query: 222 VPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRK 401
H + ++ +HQAIHTIEFVLG VSHTASYLRLWALSLAHAQL++V W M+LR
Sbjct: 731 ---DEHGEFNFGDIMVHQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVLRM 787
Query: 402 GLMSNDYQGGIFLYVVF 452
L + G + ++F
Sbjct: 788 SLTMGGWGGSAAITILF 804
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 99.1 bits (236), Expect = 1e-21
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRAR--QGHQPVXXXXXXXXXXXXP 221
+ Q ++ + +++A++ VP+ML KP++I + GH P
Sbjct: 685 YPNQSLVELILLLIAVVSVPVMLLVKPFYIRWRHSRGLHIDLGHGP-------------- 730
Query: 222 VPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRK 401
H + ++ +HQAIHTIEFVLG VSHTASYLRLWALSLAHAQL++V W M+LR
Sbjct: 731 ---DEHGEFNFGDIMVHQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVLRM 787
Query: 402 GLMSNDYQGGIFLYVVF 452
L + G + ++F
Sbjct: 788 SLTMGGWGGSAAITILF 804
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 99.1 bits (236), Expect = 1e-21
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +3
Query: 48 FSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRAR--QGHQPVXXXXXXXXXXXXP 221
+ Q ++ + +++A++ VP+ML KP++I + GH P
Sbjct: 685 YPNQSLVELILLLIAVVSVPVMLLVKPFYIRWRHSRGLHIDLGHGP-------------- 730
Query: 222 VPASGHHDEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRK 401
H + ++ +HQAIHTIEFVLG VSHTASYLRLWALSLAHAQL++V W M+LR
Sbjct: 731 ---DEHGEFNFGDIMVHQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVLRM 787
Query: 402 GLMSNDYQGGIFLYVVF 452
L + G + ++F
Sbjct: 788 SLTMGGWGGSAAITILF 804
>Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical
protein F20G2.6b protein.
Length = 218
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 36 DDFMFSGQMFIQKLFVIVALLCVPIMLFGKPYFIMREQKQRARQG 170
DD M ++ + V+ AL + I++ + +F MR++++RAR+G
Sbjct: 47 DDQMDMSRVLVIAPLVVFALFFLTILML-RSFFSMRDKRRRARRG 90
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 245 RRDHRGLHSPGHPHHRVRVGQ 307
RR HR H PGHP V Q
Sbjct: 253 RRRHRESHHPGHPEECVSASQ 273
>Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = +3
Query: 243 DEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRKGLMSNDY 422
DE+I ++ + + F+L + T ++LW +S ++ + AWN+ + ++ +
Sbjct: 132 DEKINQIRWLKKKNAANFILSTNDKT---IKLWKISERERKIGDDAWNLPRTNRINTSSF 188
Query: 423 QG 428
+G
Sbjct: 189 RG 190
>Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = +3
Query: 243 DEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRKGLMSNDY 422
DE+I ++ + + F+L + T ++LW +S ++ + AWN+ + ++ +
Sbjct: 132 DEKINQIRWLKKKNAANFILSTNDKT---IKLWKISERERKIGDDAWNLPRTNRINTSSF 188
Query: 423 QG 428
+G
Sbjct: 189 RG 190
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 245 RRDHRGLHSPGHPHHRVRVGQ 307
RR HR H PGHP V Q
Sbjct: 253 RRRHRESHHPGHPEECVSASQ 273
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -1
Query: 140 HDEVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALRRACSPGIH 3
H E + +H H + H+H++ + +SG E ++R+ G H
Sbjct: 176 HHEHQKRSEHVEHQAEMHEHQKRSTQEVSGHPEHHLVKRSGGEGGH 221
>AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B
regulatory subunit PR55/B protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = +3
Query: 243 DEEITEVFIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRKGLMSNDY 422
DE+I ++ + + F+L + T ++LW +S ++ + AWN+ + ++ +
Sbjct: 132 DEKINQIRWLKKKNAANFILSTNDKT---IKLWKISERERKIGDDAWNLPRTNRINTSSF 188
Query: 423 QG 428
+G
Sbjct: 189 RG 190
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
E R+ E H +H+QL +HL E EV L+
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
E R+ E H +H+QL +HL E EV L+
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
E R+ E H +H+QL +HL E EV L+
Sbjct: 580 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLK 615
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 134 EVRLPEQHDGHAQQSHDHEQLLYEHLSGEHEVVALR 27
E R+ E H +H+QL +HL E EV L+
Sbjct: 820 EARMNELTKIHEMLMEEHDQLKVDHLHTEEEVERLK 855
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/47 (23%), Positives = 16/47 (34%)
Frame = -2
Query: 166 CLARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCA 26
C+ +C C H T FC +CPE+ C+
Sbjct: 816 CIKKCKCQGTATSSCNRVSGACHCHPGFTGEFCHALCPESTFGLKCS 862
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/47 (23%), Positives = 16/47 (34%)
Frame = -2
Query: 166 CLARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCA 26
C+ +C C H T FC +CPE+ C+
Sbjct: 816 CIKKCKCQGTATSSCNRVSGACHCHPGFTGEFCHALCPESTFGLKCS 862
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/47 (23%), Positives = 16/47 (34%)
Frame = -2
Query: 166 CLARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCA 26
C+ +C C H T FC +CPE+ C+
Sbjct: 816 CIKKCKCQGTATSSCNRVSGACHCHPGFTGEFCHALCPESTFGLKCS 862
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/47 (23%), Positives = 16/47 (34%)
Frame = -2
Query: 166 CLARCFCSRMMKYGFPNSMMGTHSRATITNSFCMNICPENMKSSHCA 26
C+ +C C H T FC +CPE+ C+
Sbjct: 816 CIKKCKCQGTATSSCNRVSGACHCHPGFTGEFCHALCPESTFGLKCS 862
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,194,531
Number of Sequences: 27780
Number of extensions: 136697
Number of successful extensions: 664
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -