Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0896
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U65579-1|AAB51776.1|  210|Homo sapiens mitochondrial NADH dehydr...   316   3e-86
BC119754-1|AAI19755.1|  210|Homo sapiens NADH dehydrogenase (ubi...   316   3e-86
AF038406-1|AAC34273.1|  210|Homo sapiens NADH dehydrogenase-ubiq...   316   3e-86
AK223114-1|BAD96834.1|  210|Homo sapiens NADH dehydrogenase (ubi...   316   6e-86
BC119753-1|AAI19754.1|   64|Homo sapiens NDUFS8 protein protein.      120   5e-27

>U65579-1|AAB51776.1|  210|Homo sapiens mitochondrial NADH
           dehydrogenase-ubiquinone Fe-S protein 8, 23 kDa subunit
           prec protein.
          Length = 210

 Score =  316 bits (777), Expect = 3e-86
 Identities = 138/164 (84%), Positives = 154/164 (93%)
 Frame = +2

Query: 167 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRF 346
           YKYVN ++ +M  ++++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 347 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGF 526
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGF 155

Query: 527 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEI 658
           CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLL+NGDKWE+EI
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEI 199


>BC119754-1|AAI19755.1|  210|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
           reductas protein.
          Length = 210

 Score =  316 bits (777), Expect = 3e-86
 Identities = 138/164 (84%), Positives = 154/164 (93%)
 Frame = +2

Query: 167 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRF 346
           YKYVN ++ +M  ++++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 347 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGF 526
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGF 155

Query: 527 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEI 658
           CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLL+NGDKWE+EI
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEI 199


>AF038406-1|AAC34273.1|  210|Homo sapiens NADH
           dehydrogenase-ubiquinone Fe-S protein 8 23 kDa subunit
           protein.
          Length = 210

 Score =  316 bits (777), Expect = 3e-86
 Identities = 138/164 (84%), Positives = 154/164 (93%)
 Frame = +2

Query: 167 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRF 346
           YKYVN ++ +M  ++++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 347 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGF 526
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGF 155

Query: 527 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEI 658
           CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLL+NGDKWE+EI
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEI 199


>AK223114-1|BAD96834.1|  210|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
           reductas protein.
          Length = 210

 Score =  316 bits (775), Expect = 6e-86
 Identities = 138/164 (84%), Positives = 153/164 (93%)
 Frame = +2

Query: 167 YKYVNAEEQDMSFRAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRF 346
           YKYVN ++ +M   +++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRF
Sbjct: 36  YKYVNMQDPEMDMESVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95

Query: 347 RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGF 526
           RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGF
Sbjct: 96  RGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGF 155

Query: 527 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEI 658
           CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLL+NGDKWE+EI
Sbjct: 156 CQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEI 199


>BC119753-1|AAI19754.1|   64|Homo sapiens NDUFS8 protein protein.
          Length = 64

 Score =  120 bits (289), Expect = 5e-27
 Identities = 51/53 (96%), Positives = 53/53 (100%)
 Frame = +2

Query: 500 MTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEI 658
           MTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLL+NGDKWE+EI
Sbjct: 1   MTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEI 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,266,828
Number of Sequences: 237096
Number of extensions: 2119786
Number of successful extensions: 5180
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5172
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)