Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0892
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 91 1e-18
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 83 3e-16
01_06_0824 - 32243495-32244319,32244449-32244859 78 6e-15
05_06_0044 - 25150322-25151260 77 1e-14
11_02_0012 - 7346282-7347136,7347234-7347593 76 3e-14
11_02_0011 - 7337618-7338496,7338596-7338991 58 5e-14
11_01_0767 + 6438648-6438809,6439146-6440000 67 1e-11
11_01_0750 - 6315126-6315896,6316371-6316784 67 1e-11
04_04_0619 + 26652923-26653267,26653440-26654273 64 8e-11
01_01_1152 + 9170628-9171899 63 2e-10
11_01_0771 + 6453130-6454488 61 9e-10
11_02_0014 - 7352619-7352918,7353173-7353418 33 0.28
09_03_0056 - 11936264-11939677 31 0.65
03_02_0930 - 12480983-12481888 31 0.86
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409... 30 2.0
12_01_0410 - 3234836-3234958,3235636-3235776,3235899-3235949,323... 29 3.5
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 3.5
01_05_0618 + 23723441-23723465,23724733-23724788,23725108-237253... 29 3.5
12_01_0917 + 9010666-9011022 29 4.6
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344... 29 4.6
12_01_0404 + 3200787-3200898,3201016-3201091,3201442-3201544,320... 28 6.1
12_01_0786 - 7181513-7181635,7181898-7182047,7184699-7184778,718... 28 8.0
02_05_1133 + 34346894-34347121,34347222-34347283,34347373-343474... 28 8.0
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 90.6 bits (215), Expect = 1e-18
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 10/226 (4%)
Frame = +3
Query: 33 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQS 212
IK + +D T + + N ++F+G W F+AS+T++ +FH+ + +++ P M +
Sbjct: 229 IKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFMSTSKK 288
Query: 213 LFYTENEELGAKMIELPYKEPG----FRMVVVLPDKIDGLPAVLEKA-AEKGLLEDVFNL 377
+ + L K+++LPY++ G F M ++LP+ DGL ++ EK +E LE
Sbjct: 289 QYILSYDNL--KVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFLEKHIPT 346
Query: 378 SPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAP-----GIVKNDQVVVSRAFQ 542
+ ++PKF+I G + + +L +G+ F A + + VS F
Sbjct: 347 RQVTVG-QFKLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFH 405
Query: 543 EAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLI 680
++FV+V+EEG A A T + F DHPFLFLI
Sbjct: 406 KSFVEVNEEGTEAAAATAAVIT----LRSAPIAEDFVADHPFLFLI 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 10/226 (4%)
Frame = +3
Query: 33 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQS 212
IK + I+ T + + N ++F+G W F+ S+TE+ +FH+ + +++ P M +
Sbjct: 481 IKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKK 540
Query: 213 LFYTENEELGAKMIELPYKEPG----FRMVVVLPDKIDGLPAVLEKA-AEKGLLEDVFNL 377
+ + + L K+++LPY + G F M ++LP+ DGL ++ EK +E +E+ +
Sbjct: 541 QYLSSYDSL--KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFMENHIPM 598
Query: 378 SPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGIVKND-----QVVVSRAFQ 542
P + ++PKF+I G + +L +G+ +F I D + VS F
Sbjct: 599 RPVHVG-QFKLPKFKISFGFGASGLLKGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFH 657
Query: 543 EAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLI 680
++F++V+EEG A A AV F DHPF+FLI
Sbjct: 658 KSFIEVNEEGTEATA-----AVMVSMEHSRPRRLNFVADHPFMFLI 698
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 82.6 bits (195), Expect = 3e-16
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Frame = +3
Query: 33 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQS 212
IK + +D T + + N ++F+G W F+AS+T++ +F + + ++ P M +
Sbjct: 21 IKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKK 80
Query: 213 LFYTENEELGAKMIELPYKEPG----FRMVVVLPDKIDGLPAVLEKA-AEKGLLEDVFNL 377
+ + + L K+++LPY++ F M ++LP+ DGL ++ K +E LE
Sbjct: 81 QYLSSYDSL--KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPT 138
Query: 378 SPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAP-----GIVKNDQVVVSRAFQ 542
+ ++PKF+I G + + +L +G+ F A G + + VS F
Sbjct: 139 RQVTVG-KFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFH 197
Query: 543 EAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLI 680
++FV+VDEEG A A + + F DHPFLFLI
Sbjct: 198 KSFVQVDEEGTEAAAASAAVV----SFRSAPVTVDFVADHPFLFLI 239
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 78.2 bits (184), Expect = 6e-15
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 20/243 (8%)
Frame = +3
Query: 12 SARGSRHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKP 191
SA R IK + +D +D AT + N ++F+G W F+A T + F++ + + P
Sbjct: 151 SATAGR-IKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAP 209
Query: 192 TMRLLQSLFYTENEELGAKMIELPYKEPG----------FRMVVVLPDKIDGLPAVLEKA 341
M + + G K++ LPY G F M + LPD+ GLP +L K
Sbjct: 210 FMSSGKWQYIACRA--GYKVLRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLPDMLRKL 267
Query: 342 AEK--GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGIVKN- 512
L+E L+ +P+F + + L ++G+ F+ P + +
Sbjct: 268 CSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAETLRQLGLRLPFEYPGADLSEMV 327
Query: 513 ------DQVVVSRAFQEAFVKVDEEGATAGAFTGLI-AVPTXXXXXXXXXXXFKVDHPFL 671
+++VVS + E+FV+V+EEG A A T ++ + F DHPF+
Sbjct: 328 ESSPEAEKIVVSAVYHESFVEVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFM 387
Query: 672 FLI 680
FLI
Sbjct: 388 FLI 390
>05_06_0044 - 25150322-25151260
Length = 312
Score = 77.0 bits (181), Expect = 1e-14
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 17/224 (7%)
Frame = +3
Query: 69 ATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMR-LLQSLFYTENEELGA 245
+ +V + N ++F +W PF TEE DFHV ++ P M Q F G
Sbjct: 75 SASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGF 134
Query: 246 KMIELPYKEPG-------FRMVVVLPDKIDGLPAVLEKAAEKG---LLEDVFNLSPAGRD 395
++ + Y+ G F M + LPD DGLP + K A L + P
Sbjct: 135 NVLRMMYRTGGAAGGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVG 194
Query: 396 IELEIPKFEIRSGLDLNIILPKVGVSKIFQEPA----PGIVKN--DQVVVSRAFQEAFVK 557
EL+IPKFE+ ++ + +L + G+ F A G++ + VS + FV
Sbjct: 195 -ELKIPKFEVSLKVEASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVN 253
Query: 558 VDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLILHE 689
V+EEG A A G + F DHPFLF I+ E
Sbjct: 254 VNEEGTVAAA--GTVGEIMGFAMPDDQIVDFVADHPFLFFIVEE 295
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 75.8 bits (178), Expect = 3e-14
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 32/251 (12%)
Frame = +3
Query: 33 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQS 212
I+ + + + TA+ + N I+F+G W PF T FH + +++ P M +
Sbjct: 140 IREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSRED 199
Query: 213 LFYTENEELGAKMIELPY----------------------KEPGFRMVVVLPDKIDGLPA 326
+ + G K+++LPY + G M + LPD DGLPA
Sbjct: 200 QYIGFYD--GFKVLKLPYHRTMKNHGDGGDITPAILKHYGENVGLSMYIFLPDARDGLPA 257
Query: 327 VLEK--AAEKGLLEDVF--NLSPAGRDI---ELEIPKFEIRSGLDLNIILPKVGVSKIF- 482
+++K A G F + P R I +L +P+F++ ++N +L +G+ F
Sbjct: 258 LVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFYSEMNEVLKGMGIGAAFD 317
Query: 483 --QEPAPGIVKNDQVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKV 656
+ G++ + VVV + A V+V+EEG A A T F
Sbjct: 318 VGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAATA--CTMKFLCLTLTSPVDFVA 375
Query: 657 DHPFLFLILHE 689
DHPF F ++ E
Sbjct: 376 DHPFAFFVVEE 386
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 57.6 bits (133), Expect(2) = 5e-14
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Frame = +3
Query: 276 GFRMVVVLPDKIDGLPAVLEK-AAEKGLLEDVFNLSPA-GRDI-ELEIPKFEIRSGLDLN 446
G M + LPD+ DGLPA+++K AA + + P R++ +L +P+F++ +N
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQIN 320
Query: 447 IILPKVGVSKIF---QEPAPGIVKN-DQ----VVVSRAFQEAFVKVDEEGATAGAFTGLI 602
+L +GV+ F + G+ + DQ +VV F A V+V+EEG A A T
Sbjct: 321 GVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTAC- 379
Query: 603 AVPTXXXXXXXXXXXFKVDHPFLFLILHE 689
T F DHPF F ++ E
Sbjct: 380 ---TIRLLSMSYPEDFVADHPFAFFVVEE 405
Score = 37.5 bits (83), Expect(2) = 5e-14
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 72 TAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKM 251
TA+ + N I+F+G W PF S T FH + +++ P M + + ++ G +
Sbjct: 165 TALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHD--GFTV 222
Query: 252 IELPY 266
++LPY
Sbjct: 223 LKLPY 227
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 67.3 bits (157), Expect = 1e-11
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 30/255 (11%)
Frame = +3
Query: 15 ARGSRHIKTPVSEDKIDPA-TAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKP 191
AR ++++ T V + + T + N I+F+G W PF+ S+T E++F + ++++ P
Sbjct: 67 ARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVP 126
Query: 192 TMRLLQSLFYTENEELGAKMIELPYKE-------------PGFRMVVVLPDKIDGLPAVL 332
M+ ++ G +++ LPYK P F M+V LPD DGLP +L
Sbjct: 127 FMQRPSGSYHHVACHDGFRVLRLPYKATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPGLL 186
Query: 333 EKAAEKGLLEDVFNLSPAGRDI-ELEIPKFEIR-SGLDLNIILPKVGVS---KIFQEPAP 497
++ D +L P + +PKF++ + +L +G+ +F
Sbjct: 187 DRITASPEFVDE-HLPPGCVPVGRFRVPKFKLAFCHYGIADVLRGLGLRLPFDMFAAEMS 245
Query: 498 GI-VKND----QVVVSRAFQEAFVKVDEEGATAGAFTGL------IAVPTXXXXXXXXXX 644
GI V+ D + VS + V+V+EEG+ A A+T ++
Sbjct: 246 GIAVEGDGEDAAMFVSSVIHKVVVEVNEEGSEAAAYTEESDDDLGCSLYDDDYTPPPKLV 305
Query: 645 XFKVDHPFLFLILHE 689
F DHPF F I+ E
Sbjct: 306 DFVADHPFAFFIVEE 320
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 67.3 bits (157), Expect = 1e-11
Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Frame = +3
Query: 6 RNSARGSRHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 185
++S +G+ + T + ID T + + + ++F+G W + T E+ F+ + T+++
Sbjct: 151 KDSTKGT--VTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVE 208
Query: 186 KPTMRLLQSLFYTENEELGAKMIELPYK----EPGFRMVVVLPDKIDGLPAVLEKA-AEK 350
P + ++ + ++ K+I+LPYK E F M + LPD DGL + +K +E
Sbjct: 209 VPFVEYDRTRLFAVHDNF--KVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEP 266
Query: 351 GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAP--GIVKNDQ-- 518
LE +L + + +P F+I +D+ L +G+ F A ++K D
Sbjct: 267 MFLEQ--HLPTEKCHVGISVPNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSS 324
Query: 519 --VVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLILHE 689
+ +S +A ++VD++G + + + P FK DHPF F+I E
Sbjct: 325 GPLFLSDVLHKAVLEVDQKGIEETSVSMGLGKPLPAQH-------FKADHPFFFMIREE 376
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 64.5 bits (150), Expect = 8e-11
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 23/240 (9%)
Frame = +3
Query: 33 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQS 212
+ +S +T + N + F+ W F + +T+ + FH + T + P + ++
Sbjct: 135 LNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRT 194
Query: 213 LFYTENEELGAKMIELPYK-----------EPGFRMVVVLPDKIDGLPAVLEKAAEKGLL 359
+ + LG K+++L YK P F M+V LP K DGL +L A +
Sbjct: 195 HYAARFDGLGFKVLQLFYKMVGHDGQVHFGAPCFCMLVFLPIKRDGLRHLLRMAVTEP-- 252
Query: 360 EDVFNLSPAGRD--IELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGIVK-------- 509
+ V P +PKF+ S LD L K+G+ F A + +
Sbjct: 253 DFVMRCVPRSEQEVSPCMVPKFKFSSELDARGALAKLGLGAPFDPLAADLSRMAVSVNTP 312
Query: 510 NDQVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPT--XXXXXXXXXXXFKVDHPFLFLIL 683
+++ VS Q+ V+VDEEG TA T PT F +HPF+F I+
Sbjct: 313 PERLYVSAMRQKCAVEVDEEGTTAVEATYSCCSPTYSGPESPKPRPMSFVAEHPFMFAIV 372
>01_01_1152 + 9170628-9171899
Length = 423
Score = 63.3 bits (147), Expect = 2e-10
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 16/235 (6%)
Frame = +3
Query: 33 IKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQS 212
I+ + + +D +T V + N + F+G W +PF+ S T FH+ + ++ P M
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIP 234
Query: 213 LFYTENEELGAKMIELPYKEPG------------FRMVVVLPDKIDGLPAVLEKAAEKGL 356
G ++LPYK G F M+++LPD L
Sbjct: 235 FERHVAAFPGFTALKLPYKNVGGGGGGDGVPRAAFYMLLLLPDGDGALKLADLYDMAVTT 294
Query: 357 LEDVFNLSPAGRD--IELEIPKFEIRSGLDLNIILPKVGVSKIFQ--EPAPGIVKNDQVV 524
E + +PA L +PKF+ + + K+GV++ F + + + D +
Sbjct: 295 PEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAKSDMRKLGVTRAFAGGDFSGMVTGGDGLF 354
Query: 525 VSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLILHE 689
++ + +A ++VDE G A A T AV F D PFLF ++ E
Sbjct: 355 IAEVYHQATIEVDELGTVAAAST---AVVMMQKGSSLPPVDFVADRPFLFAVVEE 406
>11_01_0771 + 6453130-6454488
Length = 452
Score = 60.9 bits (141), Expect = 9e-10
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 31/241 (12%)
Frame = +3
Query: 60 IDPATAVAMFNVIFFQGHWHVPFNASETEEKDF--HVDEKTTIKKPTMRLLQSLFYTE-N 230
+ P TAV + N I+F+G W PFN S+TE K F H + + S Y
Sbjct: 198 VGPETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDGAAAAAAVADVPYMSSRSYQRVA 257
Query: 231 EELGAKMIELPYKEP--------------------GFRMVVVLPDKIDGLPAVLEKAAEK 350
G K+++L Y+ P + M + LPD DGL ++E+ A +
Sbjct: 258 VHDGFKVLKLRYRSPRLLRDKRKRGGGGDVGGEFTRYAMAIFLPDARDGLRGLVERMASR 317
Query: 351 -GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGI---VKND- 515
G L + + E +PKF++ G + L ++G+ F + V++D
Sbjct: 318 PGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDG 377
Query: 516 ---QVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXXFKVDHPFLFLILH 686
+ V +A ++V+EEG A A T +P+ F +HPF + I+
Sbjct: 378 SGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRMLPS---GVPPPPVDFVAEHPFAYFIVE 434
Query: 687 E 689
E
Sbjct: 435 E 435
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 72 TAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKM 251
T + + N I+F+G W PF T FH + +++ MR + + + G +
Sbjct: 115 TTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGFYD--GFNV 172
Query: 252 IELPY 266
++LPY
Sbjct: 173 LKLPY 177
>09_03_0056 - 11936264-11939677
Length = 1137
Score = 31.5 bits (68), Expect = 0.65
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 637 GGGLDSEDVGTAISPVKAPAVAPSSSTFTKASWKALETTTWSFLTM 500
GGG E G A++ APA A S T+ASW+ + T +F M
Sbjct: 24 GGGGGVEGAGAAVAA--APATARRSRKRTRASWRTVTTDPSNFRAM 67
>03_02_0930 - 12480983-12481888
Length = 301
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -2
Query: 646 GRDGGGLDSEDVGTAISPVKAPAVAPSSST 557
G GGG DS + GT PV APA A SSS+
Sbjct: 180 GSSGGGHDSNNAGT---PVSAPAPASSSSS 206
>05_07_0311 -
29139883-29140359,29140641-29140788,29140883-29140959,
29141227-29141387,29141785-29142803,29142905-29142996,
29143117-29143256,29143397-29143574
Length = 763
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -2
Query: 640 DGGGLDSEDVGTAISPVKAPAVAPSSSTFTKASWKALETTTWSFLTM-PGAGSWNIFDTP 464
D G + P++ PAV PSSS ++ ++ + + T S + PG ++ +T
Sbjct: 189 DSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETN 248
Query: 463 TLGKIILRSSPLRISNLGISNSMS 392
+ K + S++ +S+S S
Sbjct: 249 STFKKEATKDNFQHSDVNVSDSES 272
>12_01_0410 -
3234836-3234958,3235636-3235776,3235899-3235949,
3236045-3236125,3236427-3236483,3236898-3236993,
3237204-3237379,3237630-3237703,3237909-3238016,
3238100-3238236,3238396-3238446,3239032-3239142,
3239291-3239363,3240322-3240398,3240641-3240706,
3241349-3241463,3242255-3242511
Length = 597
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 646 GRDGGGLDSEDVGTAISPVKAPAVAPSSS 560
G GGG++ E VG + SP + PA AP++S
Sbjct: 8 GGGGGGVE-EGVGESSSPPRDPAAAPAAS 35
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 477 IFQEPAPGIVKNDQVVVSRAFQEAFVKVDEEGATAGAFTG 596
+F+ PAP I ++ AF+ A V D +GA A G
Sbjct: 20 LFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLG 59
>01_05_0618 +
23723441-23723465,23724733-23724788,23725108-23725372,
23725623-23725759,23725849-23725943,23726033-23727057,
23727293-23727453,23727816-23727892,23727978-23728125,
23728364-23728441,23728611-23728838
Length = 764
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -2
Query: 631 GLDSEDVGTAISPVKAPAVAPSSSTFTKASWKALETTTWSFLTM-PGAGSWNIFDTPTLG 455
G + DV + ++ PAV P+SS + ++++ E T S + PG ++ DT
Sbjct: 248 GKTTTDVKEPRTSIRGPAVTPNSSPDLETTFESTEAGTSSVSSSDPGTSPYSASDTNGSM 307
Query: 454 KIILRSSPLRISNLGISNSMS 392
K ++ R+ +L I+ S S
Sbjct: 308 KKEAPATKDRVQHLDINISDS 328
>12_01_0917 + 9010666-9011022
Length = 118
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 667 NGWSTLNGRDGGGLDSEDVGTA 602
NGW GR GGG+ +D G A
Sbjct: 46 NGWQRRRGRSGGGVRVDDDGNA 67
>06_01_0485 -
3444240-3444398,3444507-3444572,3444644-3444724,
3444823-3444900,3444980-3445075,3445363-3445405,
3445498-3445571,3445693-3445781,3445887-3445935,
3446171-3446227,3446309-3446425,3448633-3448698,
3449140-3449196,3449271-3449363,3449515-3449662,
3449753-3449902,3449979-3450181,3450319-3450438,
3450530-3450694,3450784-3450870,3450951-3451100,
3451225-3451365,3451399-3451569,3452015-3452091,
3452175-3452415,3452495-3452758,3452913-3453000,
3453099-3453481
Length = 1170
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 238 WVQR**SYRIRSQDSVWSWFCPTKLTDYLQCWRKLLKRVYLK 363
WV R+++ WS FCP + CW +++Y K
Sbjct: 364 WVPDLFMQRVQNNQE-WSLFCPNEAPGLADCWGDEFEKLYTK 404
>12_01_0404 +
3200787-3200898,3201016-3201091,3201442-3201544,
3202109-3202160,3202239-3202333,3202703-3202768,
3202910-3203419,3203598-3203756,3204022-3204321,
3204867-3205193,3205548-3205754,3205978-3206076,
3206193-3206251,3206294-3206639
Length = 836
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 264 TVTLSSLHPILRFQCKTKTVRDALSVS*WSFFH 166
T ++ L+ ILR CKTK D V W + +
Sbjct: 472 TTSIGQLNSILRQACKTKEKEDLRKVDNWQYIN 504
>12_01_0786 -
7181513-7181635,7181898-7182047,7184699-7184778,
7185710-7186098,7186499-7186628,7186793-7187183
Length = 420
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 661 WSTLNGRDGGGLDSEDVGTAISPVKAPAVAPSSSTF 554
WST G + +D E G + S APA+AP +
Sbjct: 81 WSTAFGNNCSKIDGEYGGASTSSSAAPALAPPQEDY 116
>02_05_1133 +
34346894-34347121,34347222-34347283,34347373-34347460,
34348005-34348268,34348346-34348586,34348672-34348748,
34348837-34349007,34349084-34349176,34349257-34349406,
34349491-34349577,34349656-34349820,34349900-34350019,
34350244-34350446,34350547-34350696,34350779-34350926,
34351046-34351129,34351207-34351308
Length = 810
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 262 RIRSQDSVWSWFCPTKLTDYLQCWRKLLKRVYLK 363
R+++ ++ WS FCP + CW + +Y K
Sbjct: 341 RVQNNEN-WSLFCPNEAPGLADCWGDEFQNLYKK 373
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,157,910
Number of Sequences: 37544
Number of extensions: 356869
Number of successful extensions: 1159
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -