Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0873
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 96 1e-19
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 96 1e-19
AL356275-1|CAI40193.1| 144|Homo sapiens chromosome 1 open readi... 32 1.5
AL035209-1|CAI18803.1| 144|Homo sapiens chromosome 1 open readi... 32 1.5
AL391415-3|CAI21588.1| 4695|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL391415-2|CAI21587.1| 4176|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL353700-3|CAI20294.1| 4695|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL353700-2|CAI20293.1| 4176|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL353700-1|CAI20292.1| 4490|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL035690-5|CAI19770.1| 4695|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL035690-1|CAI19769.1| 4490|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL035555-4|CAI19822.1| 4695|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL035555-3|CAI19821.1| 4176|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL035555-1|CAI19819.1| 4490|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL034345-4|CAI42436.1| 4695|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL034345-3|CAI42435.1| 4176|Homo sapiens dynein, axonemal, heavy... 30 6.0
AL034345-1|CAI42433.1| 4490|Homo sapiens dynein, axonemal, heavy... 30 6.0
AF356519-1|AAK60620.1| 4490|Homo sapiens axonemal dynein heavy c... 30 6.0
AB209127-1|BAD92364.1| 400|Homo sapiens liver phosphofructokina... 30 6.0
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +2
Query: 14 STARAFLSPITNRKNLHVIKNTLATKILFEKNTNIVSGISIHRDGKDITVNIKKELIVSG 193
S A A+L P +R NL TL +++LFE T V G+ ++G+ KE+I+SG
Sbjct: 239 SAACAYLHPALSRTNLKAEAETLVSRVLFE-GTRAV-GVEYVKNGQSHRAYASKEVILSG 296
Query: 194 GSINSPQLLMLSGIGPKSDLKNLGIDVVADLP-VGENLQDHIYIPI 328
G+INSPQLLMLSGIG DLK LGI VV LP VG+NLQDH+ I I
Sbjct: 297 GAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYI 342
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +2
Query: 14 STARAFLSPITNRKNLHVIKNTLATKILFEKNTNIVSGISIHRDGKDITVNIKKELIVSG 193
S A A+L P +R NL TL +++LFE T V G+ ++G+ KE+I+SG
Sbjct: 127 SAACAYLHPALSRTNLKAEAETLVSRVLFE-GTRAV-GVEYVKNGQSHRAYASKEVILSG 184
Query: 194 GSINSPQLLMLSGIGPKSDLKNLGIDVVADLP-VGENLQDHIYIPI 328
G+INSPQLLMLSGIG DLK LGI VV LP VG+NLQDH+ I I
Sbjct: 185 GAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYI 230
>AL356275-1|CAI40193.1| 144|Homo sapiens chromosome 1 open reading
frame 132 protein.
Length = 144
Score = 32.3 bits (70), Expect = 1.5
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 490 WTSGCGICSVNKCNYLMWT-CIRQRSL 413
W+ C CS NKC+Y++ T CI R +
Sbjct: 57 WSCCCSTCSPNKCSYILMTQCIGSREM 83
>AL035209-1|CAI18803.1| 144|Homo sapiens chromosome 1 open reading
frame 132 protein.
Length = 144
Score = 32.3 bits (70), Expect = 1.5
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 490 WTSGCGICSVNKCNYLMWT-CIRQRSL 413
W+ C CS NKC+Y++ T CI R +
Sbjct: 57 WSCCCSTCSPNKCSYILMTQCIGSREM 83
>AL391415-3|CAI21588.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL391415-2|CAI21587.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL353700-3|CAI20294.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL353700-2|CAI20293.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL353700-1|CAI20292.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1465 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1491
>AL035690-5|CAI19770.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL035690-1|CAI19769.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1465 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1491
>AL035555-4|CAI19822.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL035555-3|CAI19821.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL035555-1|CAI19819.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1465 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1491
>AL034345-4|CAI42436.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL034345-3|CAI42435.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1670 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1696
>AL034345-1|CAI42433.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1465 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1491
>AF356519-1|AAK60620.1| 4490|Homo sapiens axonemal dynein heavy chain
8 protein.
Length = 4490
Score = 30.3 bits (65), Expect = 6.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 151 RYNSEHKKGVNSIGWVYKFTAAFNVVRDW 237
RYN+ KK + + WVYK + + +++ +W
Sbjct: 1465 RYNAPFKKNIQN--WVYKLSTSSDIIEEW 1491
>AB209127-1|BAD92364.1| 400|Homo sapiens liver phosphofructokinase
isoform a variant protein.
Length = 400
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -1
Query: 376 YRQR*RHAIFR---RSFENNWNVYMIL 305
+R R H + R RSFENNWN+Y +L
Sbjct: 16 WRCRAVHGVTRIPSRSFENNWNIYKLL 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,718,337
Number of Sequences: 237096
Number of extensions: 1927421
Number of successful extensions: 4056
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4054
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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