Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0873
(640 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 105 3e-25
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.8
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 7.6
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 7.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 7.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 7.6
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 105 bits (253), Expect = 3e-25
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 1/164 (0%)
Frame = +2
Query: 11 ISTARAFLSPITNRKNLHVIKNTLATKILFEKNTNIVSGISIHRDGKDITVNIKKELIVS 190
+S+ARAF++P NR NLHVI N TK+ +G+++ +G+ + ++E+I+S
Sbjct: 263 LSSARAFITPFENRSNLHVIVNATVTKV--RTLNKRATGVNVLINGRRRIIFARREVILS 320
Query: 191 GGSINSPQLLMLSGIGPKSDLKNLGIDVVADLP-VGENLQDHIYIPIVFKAPAEDGMSLT 367
GS+N+PQLLMLSGIGPK L++LGI VV DLP VGENL +H + F + T
Sbjct: 321 AGSVNTPQLLMLSGIGPKEHLRSLGIPVVVDLPGVGENLHNHQSFGMDFS--LNEDFYPT 378
Query: 368 LPIIAIEYINYITSKQGTLSDTSPHKIITFVNTTDSTATSPDMQ 499
++ Y+ ++ G LS T ++ ++ +T PD+Q
Sbjct: 379 FNQTNVD--QYLYNQTGPLSSTGLAQVTGIWHSNLTTPDDPDIQ 420
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 499 VSPRRVSPKCTSFVGHVRKTW 561
V RV + TSF GHV + W
Sbjct: 1307 VPTNRVPARITSFGGHVVRPW 1327
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 499 VSPRRVSPKCTSFVGHVRKTW 561
V RV + TSF GHV + W
Sbjct: 1303 VPTNRVPARITSFGGHVVRPW 1323
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 559 WLKGKHCSAIQRT*QRQYYNFDSSDVI 639
W G C + +R Y+N+ + DVI
Sbjct: 822 WSMGIVCWEVMSYGERPYWNWSNQDVI 848
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 459 TNVIILCGLVSDSVPCLEVI*LMYSI 382
T+ II L S +PC+ ++ L Y+I
Sbjct: 341 TDFIIYSSLSSFYIPCIIMVFLYYNI 366
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 127 NFNTQRWKRYNSEHKKGVN 183
+FN Q W+R S H+ V+
Sbjct: 82 SFNAQSWQRLTSLHELHVH 100
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = +2
Query: 527 VHLLLDMFEKHGLKENIVQQF 589
+H+L ++K +K+NI++Q+
Sbjct: 101 LHILWTSYKKVFMKDNILRQY 121
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = +2
Query: 527 VHLLLDMFEKHGLKENIVQQF 589
+H+L ++K +K+NI++Q+
Sbjct: 84 LHILWTSYKKVFMKDNILRQY 104
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 145 WKRYNSEHKKGVNSIGWVYKFTAAFNVV 228
W +NS GV+ W Y AA + +
Sbjct: 235 WLAFNSGSTYGVSGQRWQYAARAAISTM 262
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 326 IVFKAPAEDGMSLTLPIIAI 385
+VF P+E G +TL I A+
Sbjct: 233 LVFYVPSESGEKVTLGISAL 252
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,383
Number of Sequences: 438
Number of extensions: 3840
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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