Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0868
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 107 7e-24
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 107 1e-23
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 89 4e-18
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 88 8e-18
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 83 2e-16
06_01_0351 + 2537022-2538281 33 0.23
06_03_0854 + 25400855-25403741,25406174-25407708 30 2.2
11_04_0236 + 15215386-15216197,15216854-15218888,15219131-152200... 29 2.9
06_03_1146 - 28004896-28005554,28005664-28005844 29 2.9
02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545 29 2.9
11_06_0198 - 21158350-21159528 29 3.8
11_01_0734 - 6078023-6078203,6078645-6078866,6079323-6079390,607... 29 5.0
01_06_0424 - 29237398-29237730,29238620-29238668,29240099-29240544 29 5.0
01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908 28 6.6
05_03_0458 + 14280953-14281866,14281964-14282912 28 8.7
01_05_0163 - 18773962-18774297 28 8.7
01_03_0011 + 11630506-11630853 28 8.7
01_01_0101 - 766382-767487,767599-767756,767900-768615 28 8.7
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 107 bits (258), Expect = 7e-24
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Frame = +1
Query: 13 NTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIIKHPGTSDDTSAAAVAVGLRQGK 192
NTS+I IT++A+ ++RP +VIGMH+F+P M+L+EII+ TS++ + R GK
Sbjct: 124 NTSSISITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVKSFSERLGK 183
Query: 193 VVITVGDGPGFYTTRILSTMLSEAVRLLQEGVDPKE-LD-NMTKQFGFPVGAATLADEVG 366
VI D PGF RIL M++EA L GV KE +D M P+G LAD +G
Sbjct: 184 TVICSQDYPGFIVNRILMPMINEAFWALYTGVATKEDIDTGMKLGTNHPMGPLQLADFIG 243
Query: 367 IDVGSHIAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGKGFYVYEKGSKN 525
+DV + L GD ++ V AG +G+K G+G Y Y S +
Sbjct: 244 LDVCLSVLRVLHNGLGDS-KYSPCPLLVQYVDAGRLGKKRGQGVYSYRTRSSS 295
>02_02_0418 + 10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 107 bits (256), Expect = 1e-23
Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 7/227 (3%)
Frame = +1
Query: 13 NTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIIKHPGTSDDTSAAAVAVGLRQGK 192
NTS I + + ++ D++IG H+FSP M LLEI++ TS + VG K
Sbjct: 423 NTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKK 482
Query: 193 VVITVGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGID 372
V + VG+ GF R + L+ G+D +D + FG P+G L D G
Sbjct: 483 VPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYG 542
Query: 373 VGSHIAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGKGFYVYEKGSKNREVNHGAIK 552
V + A AFG R NL + +VQ G G+ +GKG+Y+YEKG K + +++
Sbjct: 543 VALAVKDIYAAAFGTRNLDSNL--VDLMVQNGRQGKSNGKGYYLYEKGGKPKP--DPSVQ 598
Query: 553 ILKDKY----ALEPRGAN-TVEDQQLRMVSRF--VNEAVLSLEEKIL 672
++ D+Y P G T+ DQ + + F VNEA ++E ++
Sbjct: 599 VVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDENVV 645
>05_04_0012 + 17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 88.6 bits (210), Expect = 4e-18
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Frame = +1
Query: 13 NTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIIKHPGTSDDTSAAAVAVGLRQGK 192
NTS I + I +S D++ G H+FSP M LLEII+ TS + V + K
Sbjct: 425 NTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIRK 484
Query: 193 VVITVGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGID 372
I VG+ GF R+ A L+ G+D +D++ +FG P+G LAD VG
Sbjct: 485 TPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFRLADLVGFG 544
Query: 373 VGSHIAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGKGFYVYE---KGSKNREVNHG 543
V +++ +R L +Q +++ G S KGFY+Y+ K S + E+N
Sbjct: 545 VAIASRKQYLQSYPERCYKSML--IQIMLEENRTGESSRKGFYLYDDKRKASPDPEMNKY 602
Query: 544 AIKILK-DKYALEPRGANTVEDQQLR-MVSRFVNEAVLSLEEKI 669
K +P+ +D+ + M+ VNEA L+E +
Sbjct: 603 IEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDEGV 646
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 87.8 bits (208), Expect = 8e-18
Identities = 53/170 (31%), Positives = 81/170 (47%)
Frame = +1
Query: 13 NTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIIKHPGTSDDTSAAAVAVGLRQGK 192
NTS I + I + D+++G H+FSP M LLEI++ TS + VG + K
Sbjct: 428 NTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKK 487
Query: 193 VVITVGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGID 372
I VG+ GF R+ A+ + G+D ++D +FG P+G LAD VG
Sbjct: 488 TPIVVGNCTGFAVNRMFFPYTQSALLFVDLGMDVYKIDRACTKFGMPMGPFRLADLVGFG 547
Query: 373 VGSHIAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGKGFYVYEKGSK 522
V + + + F +R+ L + +++ G S KGFY YE K
Sbjct: 548 VAAATGMQYLENFPERVYKSML--IPLMMEDKRTGEASRKGFYKYEDKRK 595
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 83.0 bits (196), Expect = 2e-16
Identities = 53/170 (31%), Positives = 80/170 (47%)
Frame = +1
Query: 13 NTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIIKHPGTSDDTSAAAVAVGLRQGK 192
NTS I + I ++ D++ G H+FSP M LLEI++ TS + VG + K
Sbjct: 443 NTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKK 502
Query: 193 VVITVGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGID 372
+ VG+ GF R+ S S A+ L+ G+D ++D + +FG P+G L D VG
Sbjct: 503 TPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFG 562
Query: 373 VGSHIAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGKGFYVYEKGSK 522
V +A + S ++ + + G S KGFY YE K
Sbjct: 563 VA--LASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGFYKYEGNRK 610
>06_01_0351 + 2537022-2538281
Length = 419
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +1
Query: 13 NTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIIKHPGTSDDTSAAAVAVGLRQGK 192
N S++ T +AA ++ K I Y + D+ +L+ +I SD+ +A + +G R K
Sbjct: 141 NPSSLATTPLAALAAVLPKYIRYKYLA-ADRQRLVPLINKAVVSDNFTA--LLIGNRTWK 197
Query: 193 VVITVGDGP 219
V++T+G P
Sbjct: 198 VIVTIGFSP 206
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/100 (23%), Positives = 35/100 (35%)
Frame = -1
Query: 392 TAM*EPTSIPTSSANVAAPTGKPNCFVMXXXXXXXXXXXXXLTASLSIVERIRVV*KPGP 213
T + P +PT +A AAPT P AS++ P P
Sbjct: 372 TVVAPPPPVPTPAAGAAAPTLAPASAAAHAPALSVEPDALVSPASIAPAYAAPA---PAP 428
Query: 212 SPTVMTTFPCRRPTATAAADVSSLVPGCLIISSNCILSTG 93
+P + P A A+ S GC+ I++ + G
Sbjct: 429 APAALEALAPPPPAAPASLSASGGERGCVAIANAAVAGRG 468
>11_04_0236 + 15215386-15216197,15216854-15218888,15219131-15220017,
15222420-15226194
Length = 2502
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = -1
Query: 725 WREAETKDRTNITFKGLCRIFSSNDNTASFTNLETI----RSCWSSTVLAPRGSNAYLSF 558
W AE + R + + C S N F L +I R C++ + L P+G AY S
Sbjct: 1956 WYHAEAETRQELFIRN-CYAVSPNRVIERFRGLRSITLKGRPCFADSTLVPKGWGAYAS- 2013
Query: 557 RILIAPWFTSL 525
PW +L
Sbjct: 2014 -----PWVAAL 2019
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = -1
Query: 530 SLFLEPFSYT*KPLPDLRPMYPACTKSCMIPKFPPLMRSPKALARSTAM*EPTSIPTSSA 351
SL P + T P P + PM PA + P PP +P A+A S P++ P A
Sbjct: 175 SLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPP---APAAMAPS-----PSTTPGGVA 226
Query: 350 NVAAPTG 330
P G
Sbjct: 227 QPPPPPG 233
>02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 494 PLPDLRPMYPACTKSCMIP-----KFPPLMRSPKALARSTAM*EPTSIPTSSANVAAPTG 330
P+P P+ PA SC +P + P+ S +A + A P S+P+ S V+ P
Sbjct: 203 PVPADPPVVPA---SCPVPANAATRQEPIKSSTRAWSPDDAF-RPQSLPSLSKQVSFPAS 258
Query: 329 KPNCFV 312
NC+V
Sbjct: 259 MGNCWV 264
>11_06_0198 - 21158350-21159528
Length = 392
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -2
Query: 421 CDHQRPWLDPQRC--ESRHRYQ 362
C+HQ+ W + QRC + RHR Q
Sbjct: 133 CEHQQDWWEKQRCLMDCRHRRQ 154
>11_01_0734 -
6078023-6078203,6078645-6078866,6079323-6079390,
6079919-6079981,6095129-6095782
Length = 395
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -1
Query: 446 MIPKFPPLMRSPKALARSTAM*EPTSIPTSSANVAAPTGKPN 321
+ P + PL+ + + + +S + P++ PT+ A+ AP P+
Sbjct: 172 VFPNYQPLITNNQPVVQSIPLNAPSAQPTAPASTPAPAAPPS 213
>01_06_0424 - 29237398-29237730,29238620-29238668,29240099-29240544
Length = 275
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 156 GSRCGRRSTTRKGRHHGGGWAWFLHHTYP 242
G R GRR T G GGG LHH P
Sbjct: 38 GDRRGRRGDTEAGDEAGGGDDRLLHHEDP 66
>01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908
Length = 295
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 224 KPGPSPTVMTTFPCRRPTATAAADVSSLVPGCL 126
+P P P PC P A AA SL+PGCL
Sbjct: 29 RPAPPP------PCPCPRAGAAPAAESLLPGCL 55
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -1
Query: 494 PLPDLRPM---YPACTKSCMIPKFPPLMRSPKALARSTAM*E-PTSIPTSSANVAAPT 333
PLP L+P P T SC PP SP ++++ PT SS+ +APT
Sbjct: 67 PLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPT 124
>01_05_0163 - 18773962-18774297
Length = 111
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 132 PRHQRRYIGSRCGRRS-TTRKGRHHGGGWAWF 224
PR +RR+ RC RR T KGR + W W+
Sbjct: 83 PRCRRRHTRGRCARRGWTAEKGRWN---WEWW 111
>01_03_0011 + 11630506-11630853
Length = 115
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 165 CGRRSTTRKGRHHGGGW 215
CGRR T++ HHG W
Sbjct: 7 CGRRCTSKHWNHHGSVW 23
>01_01_0101 - 766382-767487,767599-767756,767900-768615
Length = 659
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -1
Query: 452 SCMIPKFPPLMRSPKALARS 393
SC++P++ PL+R P+ A+S
Sbjct: 101 SCLLPRWNPLLRDPRLQAKS 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,771,905
Number of Sequences: 37544
Number of extensions: 532938
Number of successful extensions: 1671
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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