Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0865
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 183 1e-46
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 183 1e-46
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 38 0.010
AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical... 38 0.010
AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical... 38 0.010
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 38 0.010
AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical... 38 0.010
AC024805-12|AAK39343.1| 557|Caenorhabditis elegans Hypothetical... 34 0.091
Z93381-2|CAB07605.1| 374|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical p... 29 3.4
AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein. 29 3.4
AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical ... 29 3.4
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 183 bits (445), Expect = 1e-46
Identities = 87/205 (42%), Positives = 135/205 (65%), Gaps = 3/205 (1%)
Frame = +2
Query: 50 SYNEVADELVLE-FAAGIHGSGD--GQQYDQKNIRRRVYDALNVLMAMNIISKDKKEIRW 220
+YNEVADELV + F + D Q+YD KNIRRRVYDALNVL+AMNII+K KK+IRW
Sbjct: 91 NYNEVADELVADYFQNNLIKQIDVVKQEYDMKNIRRRVYDALNVLLAMNIITKSKKDIRW 150
Query: 221 LGLPTNSVQECNAXXXXXXXXXXXXXXXXXXXXXXXXXHISFKSLIERNKEAENKGLKPS 400
+GLP ++ QE + +S+K+L+ERN++ E+K +P
Sbjct: 151 IGLPASASQEISRLEEEKSRREASISSKKQALEEMVLQIVSYKNLVERNRKNEHKNGRPE 210
Query: 401 PSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFDKRFQIHDDIDILKRMGLLFGLDKG 580
+ +HLPF+++NT +A ++CS+S+DK+E++F+FDK+F+IHDD +ILK++ L L+
Sbjct: 211 NDTVLHLPFLIINTDKEANVECSVSSDKSEFLFSFDKKFEIHDDFEILKKLNLACSLETT 270
Query: 581 ECSEEDIERAKSMVPKSLESYVEQM 655
+ E+++ AKS +P + YV+++
Sbjct: 271 NPTAEEVKTAKSFLPTLHQHYVDEI 295
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 183 bits (445), Expect = 1e-46
Identities = 87/205 (42%), Positives = 135/205 (65%), Gaps = 3/205 (1%)
Frame = +2
Query: 50 SYNEVADELVLE-FAAGIHGSGD--GQQYDQKNIRRRVYDALNVLMAMNIISKDKKEIRW 220
+YNEVADELV + F + D Q+YD KNIRRRVYDALNVL+AMNII+K KK+IRW
Sbjct: 91 NYNEVADELVADYFQNNLIKQIDVVKQEYDMKNIRRRVYDALNVLLAMNIITKSKKDIRW 150
Query: 221 LGLPTNSVQECNAXXXXXXXXXXXXXXXXXXXXXXXXXHISFKSLIERNKEAENKGLKPS 400
+GLP ++ QE + +S+K+L+ERN++ E+K +P
Sbjct: 151 IGLPASASQEISRLEEEKSRREASISSKKQALEEMVLQIVSYKNLVERNRKNEHKNGRPE 210
Query: 401 PSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFDKRFQIHDDIDILKRMGLLFGLDKG 580
+ +HLPF+++NT +A ++CS+S+DK+E++F+FDK+F+IHDD +ILK++ L L+
Sbjct: 211 NDTVLHLPFLIINTDKEANVECSVSSDKSEFLFSFDKKFEIHDDFEILKKLNLACSLETT 270
Query: 581 ECSEEDIERAKSMVPKSLESYVEQM 655
+ E+++ AKS +P + YV+++
Sbjct: 271 NPTAEEVKTAKSFLPTLHQHYVDEI 295
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLGLPTNSVQECNA 259
+RRVYD +NVL + + K +K IRW+G N+ +E NA
Sbjct: 74 KRRVYDVINVLEGLGYVEKVEKNNIRWIG-DNNNSEEQNA 112
>AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical
protein Y48C3A.17d protein.
Length = 358
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLGLPTNSVQECNA 259
+RRVYD +NVL + + K +K IRW+G N+ +E NA
Sbjct: 71 KRRVYDVINVLEGLGYVEKVEKNNIRWIG-DNNNSEEQNA 109
>AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical
protein Y48C3A.17c protein.
Length = 332
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLGLPTNSVQECNA 259
+RRVYD +NVL + + K +K IRW+G N+ +E NA
Sbjct: 71 KRRVYDVINVLEGLGYVEKVEKNNIRWIG-DNNNSEEQNA 109
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLGLPTNSVQECNA 259
+RRVYD +NVL + + K +K IRW+G N+ +E NA
Sbjct: 71 KRRVYDVINVLEGLGYVEKVEKNNIRWIG-DNNNSEEQNA 109
>AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical
protein Y48C3A.17a protein.
Length = 412
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLGLPTNSVQECNA 259
+RRVYD +NVL + + K +K IRW+G N+ +E NA
Sbjct: 71 KRRVYDVINVLEGLGYVEKVEKNNIRWIG-DNNNSEEQNA 109
>AC024805-12|AAK39343.1| 557|Caenorhabditis elegans Hypothetical
protein Y51H7C.12 protein.
Length = 557
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 533 IDILKRMGLLFGLDKGECSEEDIERAKSMVPKSLESYVEQ 652
+D+LKR L+F + G C+E+ + + + S +S + Q
Sbjct: 480 MDVLKRQNLVFTFENGTCNEKAVRELRETIKTSFQSLIRQ 519
>Z93381-2|CAB07605.1| 374|Caenorhabditis elegans Hypothetical
protein F28G4.2 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 533 IDILKRMGLLFGLDKGECSEEDIERAKSMV 622
+D+LKR+ +F + G C+ E + A+ +V
Sbjct: 298 MDLLKRVNFIFQFENGTCNPEAFQNAREIV 327
>Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical
protein F49E12.6 protein.
Length = 600
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLGL 229
+RR+YD +NV+ A++ + K +K +W GL
Sbjct: 136 KRRIYDIVNVMEALDAMQKTNKSYYQWQGL 165
>AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein.
Length = 342
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLG 226
+RR+YD NVL + +I K K I+W G
Sbjct: 103 KRRIYDITNVLEGIGLIEKRSKNMIQWKG 131
>AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical
protein Y102A5C.18 protein.
Length = 342
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 143 RRRVYDALNVLMAMNIISK-DKKEIRWLG 226
+RR+YD NVL + +I K K I+W G
Sbjct: 103 KRRIYDITNVLEGIGLIEKRSKNMIQWKG 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,825,159
Number of Sequences: 27780
Number of extensions: 254086
Number of successful extensions: 633
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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