Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0860
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1693|AAF54952.2| 1027|Drosophila melanogaster CG14372-P...    47   2e-05
BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p pro...    33   0.30 
AY069594-1|AAL39739.1|  924|Drosophila melanogaster LD34536p pro...    33   0.30 
AE014297-959|AAF54392.2| 1112|Drosophila melanogaster CG8176-PB,...    33   0.30 
AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,...    33   0.30 
AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p pro...    31   1.2  
AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA...    31   1.2  

>AE014297-1693|AAF54952.2| 1027|Drosophila melanogaster CG14372-PB
            protein.
          Length = 1027

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = +3

Query: 243  TSSYHSLGRANKGVTACSPGSATGVTSSLTQHRLR--PEVVTTSHRVQESCI 392
            TSSYH   +  + V+  SP + + VTSSL+++R R  PE+VTTS+R+QESCI
Sbjct: 978  TSSYHLTPQPME-VSLLSPNNPS-VTSSLSEYRFRTGPEIVTTSNRIQESCI 1027


>BT015313-1|AAT94541.1| 1220|Drosophila melanogaster AT02057p
           protein.
          Length = 1220

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +3

Query: 111 GYMSLQRPPSSTKIAKMSGDDIRSEPDGGAYYNDYRKKDYKIPLTSSYHSLGRANKGVTA 290
           G M   RP S   +A  +   I+S+P GGA       + + +P      S G  N G+  
Sbjct: 347 GAMGSPRPTSPDMLAGANASGIQSQPTGGATSTVKSLRSWFLPTAKQQPSAGAGNFGM-- 404

Query: 291 CSPGSATGVTSSLT 332
              GS    T++ T
Sbjct: 405 AGSGSTNNTTTTTT 418


>AY069594-1|AAL39739.1|  924|Drosophila melanogaster LD34536p
           protein.
          Length = 924

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +3

Query: 111 GYMSLQRPPSSTKIAKMSGDDIRSEPDGGAYYNDYRKKDYKIPLTSSYHSLGRANKGVTA 290
           G M   RP S   +A  +   I+S+P GGA       + + +P      S G  N G+  
Sbjct: 138 GAMGSPRPTSPDMLAGANASGIQSQPTGGATSTVKSLRSWFLPTAKQQPSAGAGNFGM-- 195

Query: 291 CSPGSATGVTSSLT 332
              GS    T++ T
Sbjct: 196 AGSGSTNNTTTTTT 209


>AE014297-959|AAF54392.2| 1112|Drosophila melanogaster CG8176-PB,
           isoform B protein.
          Length = 1112

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +3

Query: 111 GYMSLQRPPSSTKIAKMSGDDIRSEPDGGAYYNDYRKKDYKIPLTSSYHSLGRANKGVTA 290
           G M   RP S   +A  +   I+S+P GGA       + + +P      S G  N G+  
Sbjct: 326 GAMGSPRPTSPDMLAGANASGIQSQPTGGATSTVKSLRSWFLPTAKQQPSAGAGNFGM-- 383

Query: 291 CSPGSATGVTSSLT 332
              GS    T++ T
Sbjct: 384 AGSGSTNNTTTTTT 397


>AE014297-958|AAN13430.1| 1133|Drosophila melanogaster CG8176-PA,
           isoform A protein.
          Length = 1133

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +3

Query: 111 GYMSLQRPPSSTKIAKMSGDDIRSEPDGGAYYNDYRKKDYKIPLTSSYHSLGRANKGVTA 290
           G M   RP S   +A  +   I+S+P GGA       + + +P      S G  N G+  
Sbjct: 347 GAMGSPRPTSPDMLAGANASGIQSQPTGGATSTVKSLRSWFLPTAKQQPSAGAGNFGM-- 404

Query: 291 CSPGSATGVTSSLT 332
              GS    T++ T
Sbjct: 405 AGSGSTNNTTTTTT 418


>AY061360-1|AAL28908.1|  715|Drosophila melanogaster LD28629p
           protein.
          Length = 715

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 180 SEPDGGAYYNDYRKKDYKIPLTSSYHSLGRANKGVTACS-PGSATGVTSSLTQHRLRPEV 356
           +EPDG  Y       +  +P+++S+H  G +   +   S PGS      S   HR R  V
Sbjct: 155 AEPDGTTYLQPAADTNSFVPISTSFHGEGGSTGSLDKPSAPGSFFCAPLSPHNHRARSPV 214

Query: 357 VTTS 368
            T S
Sbjct: 215 RTVS 218


>AE014296-2863|AAF49380.1|  715|Drosophila melanogaster CG7729-PA
           protein.
          Length = 715

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 180 SEPDGGAYYNDYRKKDYKIPLTSSYHSLGRANKGVTACS-PGSATGVTSSLTQHRLRPEV 356
           +EPDG  Y       +  +P+++S+H  G +   +   S PGS      S   HR R  V
Sbjct: 155 AEPDGTTYLQPAADTNSFVPISTSFHGEGGSTGSLDKPSAPGSFFCAPLSPHNHRARSPV 214

Query: 357 VTTS 368
            T S
Sbjct: 215 RTVS 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,859,902
Number of Sequences: 53049
Number of extensions: 637033
Number of successful extensions: 1706
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)