Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0859
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    28   0.081
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.2  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   9.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.2  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 0.081
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +3

Query: 390 ENRMRISDKILESVGIGHSEVSSARRALQDNEERTEKRIARRLEDNSLTKWTALKSGEEE 569
           ++R  +S ++     I HSE S+   +   +EE  E++    LE     K    + G+E 
Sbjct: 730 QHRDSLSPRVENRSAIVHSEASANANSSTSSEESREEKATTSLEAEKREKSEHCEKGKEY 789

Query: 570 SAAA 581
            AA+
Sbjct: 790 YAAS 793


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 135 EPERESIRADVDNRIKSALHDMETPNDEL 221
           EPE E  +  V        H  E PNDE+
Sbjct: 297 EPEIEISQNSVSTGSDKENHKTEEPNDEV 325


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 DFENSVANLENRMRISDKILESV 431
           DF NS+   EN++  SD + E +
Sbjct: 545 DFWNSINFNENKLHTSDTLKEEL 567


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +3

Query: 12  DKQMSRWKNKRTRVYDCNYNKGESYYRPVLDRLDGKAPIVREPERE 149
           +++ SR +N+  R  D  Y K  +    +L+    +    R  ERE
Sbjct: 234 ERRCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSRERE 279


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 363 DFENSVANLENRMRISDKILESV 431
           DF NS+   EN++  SD + E +
Sbjct: 545 DFWNSINFNENKLHTSDTLKEEL 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,484
Number of Sequences: 438
Number of extensions: 3483
Number of successful extensions: 46
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)