Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0855
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016444-5|AAB65932.1| 330|Caenorhabditis elegans Serpentine re... 29 3.1
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 28 5.4
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 7.2
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 7.2
Z81111-4|CAB03264.1| 415|Caenorhabditis elegans Hypothetical pr... 27 9.5
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 27 9.5
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 27 9.5
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 27 9.5
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 27 9.5
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 27 9.5
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 27 9.5
>AF016444-5|AAB65932.1| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 6 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/47 (23%), Positives = 21/47 (44%)
Frame = -3
Query: 342 EKMESTFFLQCSIFSSSTPNVYLCIKALMEEILCWRTMTEPIFHLQV 202
E + S+ FL+C+I ++ + W++ T +FH V
Sbjct: 12 EHISSSLFLRCTILFELVSSLIAVPLVIFSSFYIWKSQTSKLFHFNV 58
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 684 YVCILYYSLIVFLCLSLYXCTYIHCKSVFYVT 589
++ I+YY + V C+S++ C Y S+ +T
Sbjct: 69 HMVIIYYLIFVLTCISVFFCFYSLFSSLCIIT 100
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 348 ETEKMESTFFLQCSIFSSSTPNV--YLCIKALMEEILCWRT 232
E+ K F L C +FS+ P + YL K L+++ W+T
Sbjct: 1465 ESIKESHPFSLYCPVFSNPLPQISWYLNDKPLIDDKTSWKT 1505
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 348 ETEKMESTFFLQCSIFSSSTPNV--YLCIKALMEEILCWRT 232
E+ K F L C +FS+ P + YL K L+++ W+T
Sbjct: 1465 ESIKESHPFSLYCPVFSNPLPQISWYLNDKPLIDDKTSWKT 1505
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 348 ETEKMESTFFLQCSIFSSSTPNV--YLCIKALMEEILCWRT 232
E+ K F L C +FS+ P + YL K L+++ W+T
Sbjct: 1465 ESIKESHPFSLYCPVFSNPLPQISWYLNDKPLIDDKTSWKT 1505
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 348 ETEKMESTFFLQCSIFSSSTPNV--YLCIKALMEEILCWRT 232
E+ K F L C +FS+ P + YL K L+++ W+T
Sbjct: 1465 ESIKESHPFSLYCPVFSNPLPQISWYLNDKPLIDDKTSWKT 1505
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
F30H5.3 protein.
Length = 1599
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 312 CSIFSSSTPNVYLCIKALMEEILCWRTMTEPI 217
C+I S+ P+ Y C +A+ LC T EP+
Sbjct: 1172 CAIGQSTCPSGYSCQRAISGAQLCCTTNDEPV 1203
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 348 ETEKMESTFFLQCSIFSSSTPNV--YLCIKALMEEILCWRT 232
E+ K F L C +FS+ P + YL K L+++ W+T
Sbjct: 1465 ESIKESHPFSLYCPVFSNPLPQISWYLNDKPLIDDKTSWKT 1505
>Z81111-4|CAB03264.1| 415|Caenorhabditis elegans Hypothetical
protein T01G5.4 protein.
Length = 415
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 353 ALIVLRDYIWELDNLRLMFFFSICTSMN 436
ALI+ YIW + + L FF + TS+N
Sbjct: 201 ALIISNFYIWFISTVCLAFFVLVFTSIN 228
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 190 KILVLRCWKYNFTRFILEYTLKQVRIHSKLVHL 92
K+L L W+ + + +LE K++R+ KL +L
Sbjct: 486 KVLKLYSWEKSMEKMVLEVREKEIRVLKKLSYL 518
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 190 KILVLRCWKYNFTRFILEYTLKQVRIHSKLVHL 92
K+L L W+ + + +LE K++R+ KL +L
Sbjct: 486 KVLKLYSWEKSMEKMVLEVREKEIRVLKKLSYL 518
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 190 KILVLRCWKYNFTRFILEYTLKQVRIHSKLVHL 92
K+L L W+ + + +LE K++R+ KL +L
Sbjct: 486 KVLKLYSWEKSMEKMVLEVREKEIRVLKKLSYL 518
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 190 KILVLRCWKYNFTRFILEYTLKQVRIHSKLVHL 92
K+L L W+ + + +LE K++R+ KL +L
Sbjct: 486 KVLKLYSWEKSMEKMVLEVREKEIRVLKKLSYL 518
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 190 KILVLRCWKYNFTRFILEYTLKQVRIHSKLVHL 92
K+L L W+ + + +LE K++R+ KL +L
Sbjct: 486 KVLKLYSWEKSMEKMVLEVREKEIRVLKKLSYL 518
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 190 KILVLRCWKYNFTRFILEYTLKQVRIHSKLVHL 92
K+L L W+ + + +LE K++R+ KL +L
Sbjct: 486 KVLKLYSWEKSMEKMVLEVREKEIRVLKKLSYL 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,457,309
Number of Sequences: 27780
Number of extensions: 301005
Number of successful extensions: 844
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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