Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0848
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27080-1|CAA81600.1|  257|Caenorhabditis elegans Hypothetical pr...   262   2e-70
Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical pr...    38   0.006
Z30317-1|CAA82967.1|  213|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC092690-2|AAK73855.2|  745|Caenorhabditis elegans Hypothetical ...    29   3.4  
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ...    29   4.5  
AC006761-3|AAL32244.2|  860|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z27080-1|CAA81600.1|  257|Caenorhabditis elegans Hypothetical
           protein F55H2.2 protein.
          Length = 257

 Score =  262 bits (641), Expect = 2e-70
 Identities = 120/172 (69%), Positives = 147/172 (85%)
 Frame = +2

Query: 20  HGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTK 199
           H LLKKKADAL +RFR IL KI+E K LMGEVMKEAAFSLAEAKFT GDF+  V+QNV++
Sbjct: 32  HSLLKKKADALNLRFRDILRKIVENKVLMGEVMKEAAFSLAEAKFTAGDFSHTVIQNVSQ 91

Query: 200 AQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELA 379
           AQ ++R KK+NV GV LP+F++YQDG D Y+L GL +GG  +A+LKKN+  A++LLVELA
Sbjct: 92  AQYRVRMKKENVVGVFLPVFDAYQDGPDAYDLTGLGKGGANIARLKKNYNKAIELLVELA 151

Query: 380 SLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 535
           +LQT F+TLDE IK+TNRRVNAIEHVIIPR+E TL YI++ELDE+EREEF+R
Sbjct: 152 TLQTCFITLDEAIKVTNRRVNAIEHVIIPRIENTLTYIVTELDEMEREEFFR 203


>Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical
           protein Y57G11A.3 protein.
          Length = 298

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
 Frame = +2

Query: 197 KAQIKIRSKKDNVAGVTLPIFES---YQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLL 367
           K  IKI  +  ++  +   +FE+    +D +   ELA L  G Q+L K+KK+F++     
Sbjct: 21  KKPIKIEGRSGDLKQLKSALFENKGPVKDEAREEELAALKAGNQELKKMKKDFETGAVHN 80

Query: 368 VELASLQTSFVTLDEVIKIT 427
           +E    +T    L+E  K+T
Sbjct: 81  IENEDDETKIARLEERQKLT 100


>Z30317-1|CAA82967.1|  213|Caenorhabditis elegans Hypothetical
           protein T16G12.4 protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 462 MITCSMALTRLFVILITSSRVTNEVCSEANSTKSFTALWKFFFSF 328
           +ITCS  +  +F++++    +T+   SEA    ++   WK F  F
Sbjct: 103 IITCSQLILYVFLLIVIPIFLTDYFASEAQRYMNYPHEWKVFKDF 147


>AC092690-2|AAK73855.2|  745|Caenorhabditis elegans Hypothetical
           protein BE0003N10.1 protein.
          Length = 745

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 163 SSCELSFSQRESSFFHHFTHKGFSLNDF 80
           S  +L  SQR+ SF  H+   GF++N+F
Sbjct: 386 SVAQLLGSQRKKSFMLHYEFPGFAINEF 413


>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
            protein Y46G5A.1a protein.
          Length = 1085

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +2

Query: 218  SKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELAS 382
            SK+D V     P   ++   S  Y+ +  +RGG  LA+  ++ +S   +L+  AS
Sbjct: 980  SKRDFVQSSNTPTTTTHSSSSHRYQHSNSSRGGTPLAQRLRDERSGQVVLLSRAS 1034


>AC006761-3|AAL32244.2|  860|Caenorhabditis elegans Hypothetical
           protein Y41G9A.4b protein.
          Length = 860

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +2

Query: 11  Q*RHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQN 190
           Q R+ +LKK+ + LQ++      KI E K  + E+ K +      A+    +  Q+  +N
Sbjct: 755 QKRYDMLKKENETLQIQIEEKERKIHECKERLEELTKNSETEDMNAQLLCENDKQIADEN 814

Query: 191 VT 196
           +T
Sbjct: 815 LT 816


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,635,691
Number of Sequences: 27780
Number of extensions: 277975
Number of successful extensions: 770
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)