Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0835
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 440 e-124
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 440 e-124
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 440 e-124
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 440 e-124
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 440 e-124
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 440 e-124
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 440 e-124
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 440 e-124
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 430 e-121
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 423 e-119
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 369 e-102
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 272 1e-73
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 238 3e-63
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 177 8e-45
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 163 8e-41
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 163 8e-41
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 163 8e-41
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 158 4e-39
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 4e-27
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 69 3e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.44
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.58
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.58
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.1
Z68882-15|CAE17744.1| 128|Caenorhabditis elegans Hypothetical p... 27 9.4
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 9.4
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 9.4
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 9.4
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 9.4
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 9.4
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 27 9.4
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 440 bits (1084), Expect = e-124
Identities = 204/208 (98%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 26 MCDDDVAALVVE 61
MCDDDVAALVV+
Sbjct: 1 MCDDDVAALVVD 12
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 440 bits (1084), Expect = e-124
Identities = 204/208 (98%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 440 bits (1083), Expect = e-124
Identities = 203/208 (97%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 440 bits (1083), Expect = e-124
Identities = 203/208 (97%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 440 bits (1083), Expect = e-124
Identities = 203/208 (97%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 440 bits (1083), Expect = e-124
Identities = 203/208 (97%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 440 bits (1083), Expect = e-124
Identities = 203/208 (97%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 440 bits (1083), Expect = e-124
Identities = 203/208 (97%), Positives = 208/208 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCY 219
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 430 bits (1060), Expect = e-121
Identities = 197/208 (94%), Positives = 206/208 (99%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 11 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+P
Sbjct: 71 IEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTP 130
Query: 420 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 599
AMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+M
Sbjct: 131 AMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMM 190
Query: 600 KILTERGYSFTTTAEREIVRDIKEKLCY 683
KILTERGY+FTTTAEREIVRDIKEKLCY
Sbjct: 191 KILTERGYTFTTTAEREIVRDIKEKLCY 218
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 423 bits (1043), Expect = e-119
Identities = 196/201 (97%), Positives = 201/201 (100%)
Frame = +3
Query: 81 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 260
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 261 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 440
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 441 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 620
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 621 YSFTTTAEREIVRDIKEKLCY 683
YSFTTTAEREIVRDIKEKLCY
Sbjct: 185 YSFTTTAEREIVRDIKEKLCY 205
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 369 bits (908), Expect = e-102
Identities = 171/175 (97%), Positives = 175/175 (100%)
Frame = +3
Query: 159 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 338
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 339 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 518
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 519 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 683
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 175
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 272 bits (668), Expect = 1e-73
Identities = 120/209 (57%), Positives = 161/209 (77%), Gaps = 1/209 (0%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ +++YP
Sbjct: 14 DNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYP 73
Query: 240 IEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 416
+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FETFN
Sbjct: 74 MEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNV 133
Query: 417 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 596
PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL
Sbjct: 134 PALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYL 193
Query: 597 MKILTERGYSFTTTAEREIVRDIKEKLCY 683
+L GY F + E EIVR++KE CY
Sbjct: 194 RVLLRREGYEFHRSNEFEIVREMKENACY 222
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 238 bits (582), Expect = 3e-63
Identities = 112/211 (53%), Positives = 152/211 (72%), Gaps = 3/211 (1%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGILTLK 233
+NG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L +
Sbjct: 12 DNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDIN 71
Query: 234 YPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 410
YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE +
Sbjct: 72 YPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQY 131
Query: 411 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 590
++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T
Sbjct: 132 GFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITK 191
Query: 591 YLMKILTERGYSFTTTAEREIVRDIKEKLCY 683
YL+K+L +RGY+F +A+ E VR +KEKLCY
Sbjct: 192 YLIKLLLQRGYNFNHSADFETVRQMKEKLCY 222
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 177 bits (430), Expect = 8e-45
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 21/229 (9%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDSYVGDEA 203
+NG+G K G+AG+ P+ + PS V Q V G+ D ++GDEA
Sbjct: 12 DNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEA 71
Query: 204 QSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 380
S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE
Sbjct: 72 LSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENRE 131
Query: 381 KMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGY 536
+IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY
Sbjct: 132 YTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGY 191
Query: 537 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 683
+ I + +AGRD+T ++ +L +R ++ E+ + IKEK CY
Sbjct: 192 VIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCY 240
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 163 bits (397), Expect = 8e-41
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKI 284
IEHGI+TNWDDMEKI
Sbjct: 72 IEHGIVTNWDDMEKI 86
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 26 MCDDDVAALVVE 61
MCDDDVAALVV+
Sbjct: 1 MCDDDVAALVVD 12
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 163 bits (397), Expect = 8e-41
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKI 284
IEHGI+TNWDDMEKI
Sbjct: 72 IEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 163 bits (397), Expect = 8e-41
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDMEKI 284
IEHGI+TNWDDMEKI
Sbjct: 72 IEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 158 bits (383), Expect = 4e-39
Identities = 70/72 (97%), Positives = 72/72 (100%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 240 IEHGIITNWDDM 275
IEHGI+TNWDDM
Sbjct: 72 IEHGIVTNWDDM 83
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 26 MCDDDVAALVVE 61
MCDDDVAALVV+
Sbjct: 1 MCDDDVAALVVD 12
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (284), Expect = 4e-27
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Frame = +3
Query: 66 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSKR------GI 221
GS + GFAG++ P+ PS + Q+ GD + Q+KR G
Sbjct: 19 GSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKREKNFFIGT 78
Query: 222 LTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 374
+ P ++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A
Sbjct: 79 TKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRAR 138
Query: 375 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 554
REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+
Sbjct: 139 REKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAV 198
Query: 555 LRLDLAGRDLTDYLMKILTER 617
++ + G +T+ L ++L ++
Sbjct: 199 VKCPIGGDLITEQLAQMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 68.9 bits (161), Expect = 3e-12
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NG K G ++PR V SIV + +H+ V + + +E K + ++ P
Sbjct: 9 DNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-P 62
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 63 IERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFT 121
Query: 420 AMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 587
++ + L S + +V+DSG + G + +++R+D+ G+ LT
Sbjct: 122 EVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALT 181
Query: 588 DYLMKILTERGYSFTTTAEREIVRDIKEKLCY 683
+ L ++ R + E ++ + KE LC+
Sbjct: 182 NKLKDWVSYR--QLNVSEETYVINECKEDLCF 211
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 68.9 bits (161), Expect = 3e-12
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Frame = +3
Query: 60 NNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 239
+NG K G ++PR V SIV + +H+ V + + +E K + ++ P
Sbjct: 9 DNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-P 62
Query: 240 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 419
IE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 63 IERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFT 121
Query: 420 AMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 587
++ + L S + +V+DSG + G + +++R+D+ G+ LT
Sbjct: 122 EVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALT 181
Query: 588 DYLMKILTERGYSFTTTAEREIVRDIKEKLCY 683
+ L ++ R + E ++ + KE LC+
Sbjct: 182 NKLKDWVSYR--QLNVSEETYVINECKEDLCF 211
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 57.6 bits (133), Expect = 8e-09
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 3/195 (1%)
Frame = +3
Query: 108 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIW 287
P++ FP+I R + VG + R I +E I D+ K
Sbjct: 202 PQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPISATDPSVERYSIDK--DVLKAV 259
Query: 288 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 467
EL+V P ++ VLL+ P ++ QI E + + Q L LYA
Sbjct: 260 IGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYD 319
Query: 468 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTT 638
TTG+V+D G+ V + VP+ +GY + AI + + + D L L+ Y+F +
Sbjct: 320 VTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSP 378
Query: 639 AEREIVRDIKEKLCY 683
E+ I+R E+ Y
Sbjct: 379 VEKLILRFALEQTTY 393
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 505 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 410
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.58
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 192 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 371
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 372 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 524
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 650 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 516
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 61 TMAPACARPVSPATTRPAPSSRP 129
T AP PATTRPAP+S+P
Sbjct: 318 TRAPPATTRAPPATTRPAPASQP 340
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 16 QSQDVRRRCCCACSRTMAPACARPVSPATTRPAP 117
Q Q ++++C +C P+C PV T P P
Sbjct: 364 QIQIIQKQCVPSCMPACQPSCTNPVPLTTQAPVP 397
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 172 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 62
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 81 KAGFAGDDAPRAVFPSIVGRPRHQG 155
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z68882-15|CAE17744.1| 128|Caenorhabditis elegans Hypothetical
protein C47E12.12 protein.
Length = 128
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 55 SRTMAPACARPVSPATTRPAPSSRPS 132
S+T+ P PV+P T PAP P+
Sbjct: 31 SKTLTPTTPTPVTPMTMTPAPIMFPT 56
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 222 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 139
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 222 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 139
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 222 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 139
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 222 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 139
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 222 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 139
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 55 SRTMAPACARPVSPATTRPAPSSRPSWVALATRA 156
S +AP A P S A TR APS + VA RA
Sbjct: 233 SSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 55 SRTMAPACARPVSPATTRPAPSSRPSWVALATRA 156
S +AP A P S A TR APS + VA RA
Sbjct: 237 SSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,734,789
Number of Sequences: 27780
Number of extensions: 319219
Number of successful extensions: 1591
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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