Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0822
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 40 2e-04
SPBC530.03c |bag102|bag1-b|BAG family molecular chaperone regula... 32 0.079
SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 comple... 29 0.42
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 29 0.56
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 28 1.3
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 27 1.7
SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway prote... 27 3.0
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.0
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 27 3.0
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 27 3.0
SPCC576.06c |||tyrosine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 3.9
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 6.9
SPCC320.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 6.9
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 25 6.9
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 25 6.9
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 25 6.9
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 6.9
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 9.1
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.1
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 25 9.1
SPAC6G9.09c |rpl24||60S ribosomal protein L24|Schizosaccharomyce... 25 9.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 9.1
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 9.1
SPCC330.14c |rpl2402|rpl24-2|60S ribosomal protein L24|Schizosac... 25 9.1
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 25 9.1
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 263 KKDKRYLFLDEMLTRNLIKLDNIETDGKENIRQARKEAIKCIQKCI 400
+K+K+ L + E+L + L+KLD ++ G E +R RK+ + IQK +
Sbjct: 138 QKNKQKLMISELLLQQLLKLDGVDVLGSEKLRFERKQLVSKIQKML 183
>SPBC530.03c |bag102|bag1-b|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 206
Score = 31.9 bits (69), Expect = 0.079
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 287 LDEMLTRNLIKLDNIETDGKENIRQARKEAIKCIQKCIAVLEAKADSSNQQRK 445
L E L +IKLD + + R RKEAI+ Q+ + +K DS+ Q K
Sbjct: 158 LSETLLARMIKLDAVNVEDDPEARLKRKEAIRLSQQYL----SKLDSTKNQNK 206
>SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 442
Score = 29.5 bits (63), Expect = 0.42
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 203 LSIQTDVLNLMTDVENFTGTKKDKRYLFLDEMLTRNLIKLDN-IETDGKENIRQARKEAI 379
LS+Q D + T ++F G +R D +RN+++ N I +D ++NI ++K+AI
Sbjct: 125 LSLQLDT-STPTLEDSFDGNGFIQRKYVSDA--SRNVLRTFNSILSDRQQNINPSKKDAI 181
Query: 380 KCIQKCIAVL 409
CI + +L
Sbjct: 182 FCIANLLCLL 191
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 29.1 bits (62), Expect = 0.56
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +2
Query: 251 FTGTKKDKRYLFLDEMLTRNLIKLDNIET-DGKENIRQARKEAIKCIQKCIAVLEAKADS 427
F+ ++ ++ F E+L + I+ + D +E ++ E K ++ I ++E +
Sbjct: 102 FSEKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHK 161
Query: 428 SNQQRKAQPEQETQVQDECQSHDVDMKENTQND 526
N+QR+ + EQ + E ++ + MKE ++D
Sbjct: 162 ENEQRRLKQEQIDAKRKEEEAREKRMKETFKDD 194
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 443 KAQPEQETQVQDECQSHDVDMKENTQNDQTTEIPGQPIVENGEVE 577
K EQ+T + EC+ +VD + +N I P + E+E
Sbjct: 11 KVTHEQQTDIDSECEITEVDDENVNENKSQEMIQDIPARDREEIE 55
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 6 KHQKLSLRPERKNHPSNINLHRQSLLNNTSLRHRRAHSNN 125
+ L+ P+R++ LHR+SL N HR AH +N
Sbjct: 256 RRPSLTYSPKRQS----TGLHRRSLTNYFKFPHRNAHQHN 291
>SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway protein
But1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 283 VS*RDAHKEPHQVRQYRNRRQGKHPTGEEGSNQMHPKMYSSLRS 414
+S RDA E + + ++ ++ + T +E + MHP + SS R+
Sbjct: 12 ISTRDAVHEKNCTLRVKSTKKRRSSTKDEETRGMHPHIKSSFRN 55
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.0
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +2
Query: 344 KENIRQARKEAIKCIQKCIAVLEAKADSSNQQRKAQPEQETQ--VQDECQSHDVDMKENT 517
K+ ++A+K+A K +K A A + + + AQ EQ+ Q +Q+ + + K+
Sbjct: 51 KKAAKRAKKKAAKK-KKQSAAASASSTPVEEAQHAQEEQQEQTILQEPGFTQTIVEKDAD 109
Query: 518 QNDQTTEIPGQPIVENGEVEMDEATKDKPAEPQTAA 625
Q D+ P +PI + ++ T +KP+ + A
Sbjct: 110 QVDE----PLEPIASSALGTVEPPTDNKPSASTSTA 141
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 3.0
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +2
Query: 344 KENIRQARKEAIKCIQKCIAVLEAKADSS------NQQRKAQPEQETQVQDECQSHDVDM 505
K+ +++ RKE I +++ I L+ + DS + + Q + QS + D+
Sbjct: 41 KKRLQKVRKE-ISSVKEKIRRLDERIDSRLTKISVKENFRKQLSKFRDTLQSLQSDENDI 99
Query: 506 KENTQNDQTTEIPGQPIVENGEVEMDEATKDKPAEP 613
K N+ + PG E+E E + P
Sbjct: 100 KRRLNNEDSANAPGIGAFSTEELERQELIRTGKVTP 135
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 969
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 524 DQTTEIPGQPIVENGEVEMDEATKDKPAEP 613
D+ EIP I+ENG + + T K A P
Sbjct: 926 DEVYEIPNVTIIENGNMFKESMTLSKAAFP 955
>SPCC576.06c |||tyrosine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 63 LHRQSLLNNTSLRHRRAHSNNLHLNGNKLLRSLKLNNHHPLIP 191
L +SL++NT+L + N+++L + SL + N L+P
Sbjct: 11 LQARSLIHNTTLLQPSCNVNSVYLGADPTAASLHVGNLVALMP 53
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 6.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 9 HQKLSLRPERK-----NHPSNINLHRQSLLNNTSLRHRRAHS 119
H S P +K +H S +LHR+SL +NTS R+ HS
Sbjct: 89 HHSTSNTPTKKKKDSFDHASVTSLHRRSLSSNTS-TPRKYHS 129
>SPCC320.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 393 FWMHLIASFLACRMFSLPSVSILSNLMRFLVSISSRNKYL 274
+WMHLI S+ S ILSN + L +S + K+L
Sbjct: 235 YWMHLICSYYG---IYTTSTQILSNKIMTL-GVSKKRKHL 270
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 333 KQTARKTSDRRGRKQSNASKNV*QS*KPKRTVRTNKERHSPNRKHKC 473
K + T+D SN+S ++ S K R N + H P R C
Sbjct: 69 KCSTSSTTDLDSSSASNSSCSIPSSISEKLLPRDNVKTHCPKRSASC 115
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 356 RQARKEAIKCIQKCIAVLEAKADSSNQQRKAQPEQETQVQDE 481
+Q R+E++ + AVL+ D + ++Q + E Q++DE
Sbjct: 37 KQKREESLNKRRNLNAVLQNDIDVEEEADQSQVQMEQQMKDE 78
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/76 (21%), Positives = 31/76 (40%)
Frame = +2
Query: 305 RNLIKLDNIETDGKENIRQARKEAIKCIQKCIAVLEAKADSSNQQRKAQPEQETQVQDEC 484
+N ++ E D E + I +++ + L S N+Q +A P +E +
Sbjct: 142 KNELQSSTEEIDSTEKDFDELHKVILKVERELHTLRQNTPSQNEQAEATPSKEIPRETVS 201
Query: 485 QSHDVDMKENTQNDQT 532
+ D NT++ T
Sbjct: 202 EKADHPPSSNTKSVST 217
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.4 bits (53), Expect = 6.9
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 329 IETD-GKENIRQARKEAIKCIQKCIAVLEAKADSSNQQRKAQPEQETQVQDECQS--HDV 499
+ET+ ENI +K + K I + AD+SN + ETQ +DE S H
Sbjct: 766 LETNLASENIESVKKHR-DGLSK-IFIRPESADNSNNTNVSFQTDETQTEDETMSDIHPD 823
Query: 500 DMKENTQN 523
D++ ++++
Sbjct: 824 DVENHSKS 831
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/48 (20%), Positives = 24/48 (50%)
Frame = +2
Query: 410 EAKADSSNQQRKAQPEQETQVQDECQSHDVDMKENTQNDQTTEIPGQP 553
E+ + S + +R ++E + D+ + + D ++ +ND+ G P
Sbjct: 236 ESSSGSESYERDEDVDEEEEEDDDENNDEGDDEDENENDELRSENGSP 283
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.0 bits (52), Expect = 9.1
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 335 TDGKENIRQARKEAIKCIQKCIAVLEAKADSSNQQRKAQPEQETQVQDECQSHD--VDMK 508
TD E +Q + E I+ ++ ++ + +Q++A E+ ++++EC HD +D +
Sbjct: 149 TDLLEEQQQLKLE-IERLEAETERANSETEQYEKQKEALEEEYEELRNECLKHDPQLDAE 207
Query: 509 ENTQNDQTTEI 541
T D E+
Sbjct: 208 IRTLQDTFEEV 218
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 533 TEIPGQPIVENGEVEMDEATKDKPAEPQ 616
+E QP VE GE + DEA K + +
Sbjct: 197 SEFYAQPFVEEGEKDYDEAAAAKAGKSE 224
>SPAC6G9.09c |rpl24||60S ribosomal protein L24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 149
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 507 KRTHRTIRPRKSLASRSLRTVKWKWTRPPKI 599
KRT RT++ ++ + +L +K K + P++
Sbjct: 70 KRTRRTVKHQRGIVGANLDVIKEKRNQRPEV 100
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 21 SLRPERKNHPSNINLHRQSLLNNTSLRHRRAHSNNL--HLN 137
S+ P K N N + + L + SL HRR H HLN
Sbjct: 1658 SVSPTWKKSFGNANTNLKYGLEDMSLSHRRGHKRTYDEHLN 1698
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 21 SLRPERKNHPSNINLHRQSLLNNTSLRHRRAHSNNL--HLN 137
S+ P K N N + + L + SL HRR H HLN
Sbjct: 1658 SVSPTWKKSFGNANTNLKYGLEDMSLSHRRGHKRTYDEHLN 1698
>SPCC330.14c |rpl2402|rpl24-2|60S ribosomal protein
L24|Schizosaccharomyces pombe|chr 3|||Manual
Length = 149
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 507 KRTHRTIRPRKSLASRSLRTVKWKWTRPPKI 599
KRT RT++ ++ + +L +K K + P++
Sbjct: 70 KRTRRTVKHQRGIVGANLDVIKEKRNQRPEV 100
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 25.0 bits (52), Expect = 9.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 616 LWFGWFIFGG 587
LWFGWF F G
Sbjct: 234 LWFGWFGFNG 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,340,955
Number of Sequences: 5004
Number of extensions: 48085
Number of successful extensions: 226
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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