Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0811
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.1
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 8.1
AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein. 21 8.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 488 FTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQE 595
+ + EIK RA +PD DGT I + Q+
Sbjct: 545 YPIEEIKWERANRELPDDLRQKVLPDGTLVITSVQK 580
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 488 FTLAEIKTLRARERIPDIRAGNARMDGTFTIPTFQE 595
+ + EIK RA +PD DGT I + Q+
Sbjct: 545 YPIEEIKWERANRELPDDLRQKVLPDGTLVITSVQK 580
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 496 QCKIFREPTGDSRSVHCLSPVACSEFKYDLRRRL 395
Q ++ + T D V+ C E + L+RRL
Sbjct: 211 QLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRL 244
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +++ +KN ++ T + +E + PKI L+ ++ + KY
Sbjct: 38 RYSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKY 97
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +++ +KN ++ T + +E + PKI L+ ++ + KY
Sbjct: 38 RYSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKY 97
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +++ +KN ++ T + +E + PKI L+ ++ + KY
Sbjct: 38 RYSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKY 97
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +++ +KN ++ T + +E + PKI L+ ++ + KY
Sbjct: 38 RYSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKY 97
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/60 (18%), Positives = 24/60 (40%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +K +KN ++ T + +E + PKI L+ ++ + Y
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNY 97
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/60 (18%), Positives = 24/60 (40%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +K +KN ++ T + +E + PKI L+ ++ + Y
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNY 97
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/60 (18%), Positives = 24/60 (40%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +K +KN ++ T + +E + PKI L+ ++ + Y
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNY 97
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/60 (18%), Positives = 24/60 (40%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +K +KN ++ T + +E + PKI L+ ++ + Y
Sbjct: 38 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNY 97
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/60 (18%), Positives = 24/60 (40%)
Frame = -2
Query: 251 RWAMISGEQKSEFKNSELKSRFSFTGIPKVIPTVXKESTNSPKIFILLTPISVREHTKKY 72
R++ +K +KN ++ T + +E + PKI L+ ++ + Y
Sbjct: 271 RYSRSREREKKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNY 330
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 655 WINSNSSFLTFFQTFRQTNDFL 590
W N SS + F+ R DF+
Sbjct: 11 WNNYQSSITSAFENLRDDEDFV 32
>AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein.
Length = 39
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3
Query: 655 WINSNSSFLTFFQTFRQTNDFL 590
W N SS + F+ R DF+
Sbjct: 11 WNNYQSSITSAFENLRDDEDFV 32
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,773
Number of Sequences: 438
Number of extensions: 4611
Number of successful extensions: 28
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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