Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0808
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 32 1.6
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 32 1.6
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 32 1.6
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 31 2.8
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 31 2.8
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 31 2.8
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 31 2.8
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 31 2.8
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 31 2.8
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 31 4.9
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 30 6.4
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 30 6.4
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 30 6.4
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein. 30 6.4
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 30 6.4
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 30 6.4
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 2 FFAWMGWAYDLKTASTNIIEKRALRTGDGT 91
F W+G A D K A+ +IE R RTGD +
Sbjct: 104 FMCWLGLATDRKRATKPMIEARKARTGDSS 133
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 2 FFAWMGWAYDLKTASTNIIEKRALRTGDGT 91
F W+G A D K A+ +IE R RTGD +
Sbjct: 130 FMCWLGLATDRKRATKPMIEARKARTGDSS 159
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 2 FFAWMGWAYDLKTASTNIIEKRALRTGDGT 91
F W+G A D K A+ +IE R RTGD +
Sbjct: 300 FMCWLGLATDRKRATKPMIEARKARTGDSS 329
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 8 AWMGWAYDLKTASTNIIEKRALRTGDGTYK 97
A +G AYD K S I R RTGDG YK
Sbjct: 328 AALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 8 AWMGWAYDLKTASTNIIEKRALRTGDGTYK 97
A +G AYD K S I R RTGDG YK
Sbjct: 328 AALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 8 AWMGWAYDLKTASTNIIEKRALRTGDGTYK 97
A +G AYD K S I R RTGDG YK
Sbjct: 328 AALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 8 AWMGWAYDLKTASTNIIEKRALRTGDGTYK 97
A +G AYD K S I R RTGDG YK
Sbjct: 328 AALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 8 AWMGWAYDLKTASTNIIEKRALRTGDGTYK 97
A +G AYD K S I R RTGDG YK
Sbjct: 335 AALGLAYDRKKVSKAAILARIKRTGDGNYK 364
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 8 AWMGWAYDLKTASTNIIEKRALRTGDGTYK 97
A +G AYD K S I R RTGDG YK
Sbjct: 328 AALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 2 FFAWM---GWAYDLKTASTNIIEKRALRTGDGTYK 97
F WM G YD K S I R RTGDG YK
Sbjct: 323 FIDWMAALGLTYDRKKVSKAAILARIKRTGDGNYK 357
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 91 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 228
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1543 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1588
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 91 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 228
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1437 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1482
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 91 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 228
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 772 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 817
>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
Length = 1293
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 91 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 228
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1091 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1136
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 91 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 228
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 91 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 228
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,484,753
Number of Sequences: 237096
Number of extensions: 1598069
Number of successful extensions: 2293
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2293
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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