Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0800
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 100 1e-21
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 98 5e-21
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 97 1e-20
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 95 5e-20
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 95 5e-20
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 95 5e-20
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 68 6e-12
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 66 2e-11
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 64 8e-11
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 53 2e-07
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 49 3e-06
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 38 0.010
11_01_0455 + 3517281-3519798,3519888-3520261 31 1.2
01_06_1603 - 38564330-38564341,38564608-38564835 30 1.5
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389... 29 4.7
04_04_1184 + 31558678-31558707,31559485-31559644,31559732-315603... 29 4.7
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 28 6.2
11_05_0008 - 18335815-18336080,18340549-18340923,18342570-18342669 28 8.3
08_01_0412 + 3675767-3676069,3676627-3677877 28 8.3
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 28 8.3
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 100 bits (239), Expect = 1e-21
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 201
LPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N
Sbjct: 130 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 179
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
EDELRDAVLL+FANKQD
Sbjct: 113 EDELRDAVLLVFANKQD 129
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 98.3 bits (234), Expect = 5e-21
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 195
LPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 136 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 183
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
+DELRDAVLL+FANKQD
Sbjct: 119 KDELRDAVLLVFANKQD 135
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 201
LPNAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ + N
Sbjct: 130 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIAN 179
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
EDELRDAVLL+FANKQD
Sbjct: 113 EDELRDAVLLVFANKQD 129
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 95.1 bits (226), Expect = 5e-20
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 195
LPNAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 147 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 194
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
EDELRDAVLL+FANKQD
Sbjct: 130 EDELRDAVLLVFANKQD 146
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 95.1 bits (226), Expect = 5e-20
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 195
LPNAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 253 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 300
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
EDELRDAVLL+FANKQD
Sbjct: 236 EDELRDAVLLVFANKQD 252
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 95.1 bits (226), Expect = 5e-20
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 195
LPNAMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 130 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 177
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
EDELRDAVLL+FANKQD
Sbjct: 113 EDELRDAVLLVFANKQD 129
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 68.1 bits (159), Expect = 6e-12
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 195
L +AM+ AEITD L LHS++N +W+IQA+CA +G+GLY+GL W++ ++
Sbjct: 239 LKDAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKV 286
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 198
+ AM E+ + LGL+ L+NR W+IQ +CA GDGLYEGLDWL++ LK
Sbjct: 130 MKGAMTPLEVCEGLGLYDLKNRIWHIQGSCALKGDGLYEGLDWLASTLK 178
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 64.5 bits (150), Expect = 8e-11
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 61 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 195
AM E+ + LGL+ L NR W+IQ TCA GDGLYEGLDWL+ L
Sbjct: 133 AMTPMEVCEGLGLYDLNNRIWHIQGTCALKGDGLYEGLDWLATTL 177
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHS-LRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 201
L AM+++E+ +LG + L+NR W+ Q A +GDGL+ GLDWL++ L++
Sbjct: 129 LKGAMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWLASTLRD 179
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLD 177
LP A++ A IT+ L LH +++R W I T A G+GL+EGLD
Sbjct: 145 LPGALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLD 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 2 EDELRDAVLLIFANKQD 52
EDEL+ AV+L++ANKQD
Sbjct: 128 EDELKGAVVLVYANKQD 144
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 52 LPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 210
LP A+ E+ L L L R + QA A G G+ G+DWL +++ + R
Sbjct: 270 LPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEMERSKR 322
>11_01_0455 + 3517281-3519798,3519888-3520261
Length = 963
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +2
Query: 344 LVTEGAPHSFRTRCNTARCVR 406
L TEGA HSF T CN R VR
Sbjct: 682 LETEGAEHSFITECNALRKVR 702
>01_06_1603 - 38564330-38564341,38564608-38564835
Length = 79
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 89 NWVCIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 232
+W+C+ G S APL + C ++TG+ R N +S
Sbjct: 22 HWMCLHVPFTVGASVPFAPLIKPTCVEIATGAFAPERQTICNESSESS 69
>09_04_0237 -
15936630-15937250,15937457-15937534,15938874-15938973,
15940414-15942278
Length = 887
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = +2
Query: 107 CATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 286
CAT G DC++ + + + R A + +++ER G R ++
Sbjct: 564 CATCGGEWSTADDADHRDCSKGPEAAMVK-KLADERRWKACPKCRMLVERTAGCRVMSCR 622
Query: 287 CY*IQCIMCGI 319
C + C +CG+
Sbjct: 623 CRMVFCYLCGL 633
>04_04_1184 +
31558678-31558707,31559485-31559644,31559732-31560394,
31560512-31560956,31561090-31561171,31561319-31561534
Length = 531
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 101 IRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 238
+ +V P+P D +R TG+P+ S TPT + C+ T
Sbjct: 289 VHSVSVRDVGTEMTPIPSQDPSR--TGTPLGSMTPTRSPNCSIPST 332
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 162 QSVSGSGACRLDVPVTVAQRMQTQFV 85
Q +G+G C +DVP+ AQ +Q FV
Sbjct: 171 QDCNGTGCCSIDVPIR-AQTLQLMFV 195
>11_05_0008 - 18335815-18336080,18340549-18340923,18342570-18342669
Length = 246
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 177 VETLVQSVSGSGACRLDVPVTVAQRMQTQFVCYLGCVHCVWQS 49
V+ Q+ S SGA R PV Q ++ LGC VW++
Sbjct: 183 VKVEAQTKSTSGAIRSPGPVCTKTGAQVAYMLALGCSLYVWKA 225
>08_01_0412 + 3675767-3676069,3676627-3677877
Length = 517
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 349 DRRRAAFVPNQMQYGTLCALKYCFSKYYINYVYLNAI 459
D +RA PN++ YG L Y +++ Y+ AI
Sbjct: 244 DMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAI 280
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 188 ISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 286
++++ ANR C + QTN++ ++D L FI
Sbjct: 502 LTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFI 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,183,093
Number of Sequences: 37544
Number of extensions: 393343
Number of successful extensions: 986
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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