Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0795
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 157 1e-39
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 96 3e-21
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 95 1e-20
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 63 3e-11
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 60 4e-10
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.75
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.3
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 2.3
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 27 2.3
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 27 3.0
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 27 3.0
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 5.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.3
SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosacch... 26 5.3
SPCC1753.02c |git3||G-protein coupled receptor Git3|Schizosaccha... 25 7.0
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 7.0
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 25 9.3
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 25 9.3
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 25 9.3
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 9.3
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 157 bits (381), Expect = 1e-39
Identities = 73/80 (91%), Positives = 78/80 (97%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 582
VLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRD
Sbjct: 152 VLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRD 211
Query: 583 IKEKLCYVALDFEQEMATAA 642
IKEKLCYVALDFEQE+ TAA
Sbjct: 212 IKEKLCYVALDFEQELQTAA 231
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 96.3 bits (229), Expect = 3e-21
Identities = 42/73 (57%), Positives = 55/73 (75%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 582
V+DSGDGV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR+
Sbjct: 152 VVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVRE 211
Query: 583 IKEKLCYVALDFE 621
+KEKLCYV+ D E
Sbjct: 212 MKEKLCYVSYDLE 224
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 94.7 bits (225), Expect = 1e-20
Identities = 40/76 (52%), Positives = 59/76 (77%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 582
VL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL L + G+ ++AE+EIVR+
Sbjct: 157 VLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVRE 216
Query: 583 IKEKLCYVALDFEQEM 630
IKEK CYVA DF E+
Sbjct: 217 IKEKCCYVASDFRSEI 232
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 63.3 bits (147), Expect = 3e-11
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIV 576
V+DSGDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER
Sbjct: 183 VVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER--- 239
Query: 577 RDIKEKLCYVALDFEQEMA 633
IKE+ CYV D +E +
Sbjct: 240 --IKEECCYVCPDIVKEFS 256
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 582
V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV +
Sbjct: 160 VIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNE 217
Query: 583 IKEKLCYVALDFEQEM 630
IKE +CYV+ +F+++M
Sbjct: 218 IKESVCYVSQNFKEDM 233
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 582
VL+ G+ SH +P+ G + R+ G + YL+K+ + SF
Sbjct: 169 VLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAEL 228
Query: 583 IKEKLCYVALDFEQEMATA 639
+ C+V+ D+ ++A A
Sbjct: 229 LMHDHCHVSSDYTHDIAHA 247
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 0.75
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 383 PVVPPVSCSTPEMVSPTPYPSTKVTLCPTPS 475
P VP S P P P PS+++ P PS
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 374 GLAPVVPPVSCS---TPEM-VSPTPYPSTKVTLCPTPSS 478
G+ PV PP + TP + P P P+ K P PSS
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS 1244
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +2
Query: 323 NNVGKGSRQIGSVTSE*GLAPVVPPVSCSTPEMVSPTPYPSTKVTLCPTP 472
N+ K G E PV+P ++ + V TP P + L P P
Sbjct: 551 NDADKAIVAEGPNNEEETKGPVIPETQETSEQQVHKTPSPEKQKVLSPPP 600
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 383 PVVPPVSCSTPEMVSPTPYPSTKVTLCPTPSS 478
P V P S + P+M +PTP P +++ P PS+
Sbjct: 1690 PPVRPQSAAPPQMSAPTP-PPPPMSVPPPPSA 1720
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +1
Query: 403 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 549
V+D G + + EG +P++ ++++ G D+T MK+L + +
Sbjct: 295 VVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPY 343
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 286 ADMGTNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVPNHISL 158
A GT++ +IST +P P++VSGH A R+P+ S+
Sbjct: 371 ATNGTSQSNISTPLPEPTPGQPRKVSGHNPP-SARRLPSASSV 412
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.6 bits (56), Expect = 3.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 443 STKVTLCPTPSSVWTW 490
STK CP PS W W
Sbjct: 52 STKTATCPDPSWEWAW 67
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 350 IGSVTSE*GLAPVVPPVSCSTPEMVSPTPYPS 445
I V GL +SCS+PEMV+ T PS
Sbjct: 206 INKVQGRDGLLFDFDKLSCSSPEMVATTQLPS 237
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 25.8 bits (54), Expect = 5.3
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -3
Query: 194 MRCSSRSEPYLPSI-GFHGTRTLRQKRKLFPDLSAASSGHFGLPRRT 57
MR + E Y+ + G H T Q LF D + H L RRT
Sbjct: 1 MRPAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRT 47
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = +2
Query: 377 LAPVVPPVSCSTP------EMVSPTPYPSTKVTLCP 466
+ P VPP S STP + PY ST VT P
Sbjct: 409 VTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTP 444
>SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase
Exg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 323 NNVGKGSRQIGSVTSE*GLAPVVPPVSC 406
NNVG+G+R G+ T G+A V C
Sbjct: 452 NNVGEGARWDGTFTPNGGVASCSEKVGC 479
>SPCC1753.02c |git3||G-protein coupled receptor
Git3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 407 STPEMVSPTPYPSTKVTLCPTPSS 478
+ P+ V+ P+P T TL TPS+
Sbjct: 241 TAPDQVALPPFPDTNSTLTYTPSN 264
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 341 FPYLHYSID*RLFTLETCCGYGYEPARHL 255
+P+ S+D R+F LE+ GY EP L
Sbjct: 159 YPFDLDSLDKRIFKLESKIGYADEPLSEL 187
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 53 RVFDGVTQSGLKTPPRGPGRV 115
RVF G +SGLK +GP V
Sbjct: 399 RVFSGTVRSGLKVRIQGPNYV 419
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 444 LRRLRSAPRHPPSGLGWSRLDRLPHED 524
L++ + +H G WS LDR H+D
Sbjct: 254 LKKSKRVKKHDYGGEDWSLLDRKFHDD 280
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 53 RVFDGVTQSGLKTPPRGPGRV 115
RVF G +SGLK +GP V
Sbjct: 399 RVFSGTVRSGLKVRIQGPNYV 419
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 392 PPVSCSTPEMVSPTPYPSTKVTLCPTPSSVWTWLVA 499
P S ST ++PTP +T ++ PTP++ T A
Sbjct: 840 PVQSSSTTSSITPTP--TTTSSITPTPTTTSTTTTA 873
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,782,392
Number of Sequences: 5004
Number of extensions: 59538
Number of successful extensions: 236
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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