Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0789
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.54 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   2.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   3.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   3.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   3.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   6.6  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    22   6.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 15  IGTRAVFYNKVSATFQ*P*ARKTKMSSVN 101
           + T  ++YN        P  R TKMSS+N
Sbjct: 206 VETEPIYYNLTMVKLNWPKKRVTKMSSIN 234


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 156 IEIHSAHVIARKAKIKMES*VSNESPTNRHKSSIK 260
           ++ H+AH+  + A IK +    N   T  +  SIK
Sbjct: 361 LDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIK 395


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 495 TFGKYMKYKLYFRL*TNK*YKILNKIT 415
           T   Y   K+YF L   K YK+ + +T
Sbjct: 105 TISSYFVGKMYFNLIDTKCYKLEHPVT 131


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 495 TFGKYMKYKLYFRL*TNK*YKILNKIT 415
           T   Y   K+YF L   K YK+ + +T
Sbjct: 110 TISSYFVGKMYFNLIDTKCYKLEHPVT 136


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 495 TFGKYMKYKLYFRL*TNK*YKILNKIT 415
           T   Y   K+YF L   K YK+ + +T
Sbjct: 110 TISSYFVGKMYFNLIDTKCYKLEHPVT 136


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 370 SWTNFCLTEQ*IHGVDLCCNNFLKFVSN 287
           ++T FC TE+ +   +    N L+FVS+
Sbjct: 449 NYTKFCSTEKRLTKQNTAFENQLQFVSD 476


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 156 IEIHSAHVIARKAKIKMES*VSNESPTNRHKSSIK 260
           ++ H+AH+  + A+IK +        T  +  SIK
Sbjct: 361 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIK 395


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 156 IEIHSAHVIARKAKIKMES*VSNESPTNRHKSSIK 260
           ++ H+AH+  + A+IK +        T  +  SIK
Sbjct: 72  LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIK 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,517
Number of Sequences: 438
Number of extensions: 3742
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)