Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0786
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0197 + 1554449-1555101,1555462-1555558 43 2e-04
08_02_0763 + 20924057-20924848 32 0.44
05_06_0237 + 26618195-26618425,26618518-26618640,26619569-266197... 31 0.77
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 31 0.77
12_02_1211 - 27033927-27034029,27034130-27034273,27034358-270344... 31 1.0
06_01_1070 + 8750260-8750335,8750432-8751311,8753719-8754646 31 1.0
02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486 30 1.3
01_01_0179 + 1517379-1517721,1518092-1518376,1519462-1519699,151... 30 1.8
02_05_0432 + 28936293-28936796,28937382-28939250 29 2.4
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 29 2.4
06_03_0178 + 17594062-17595576 29 3.1
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 29 3.1
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 29 4.1
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 29 4.1
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583... 29 4.1
07_01_0886 - 7356591-7356662,7357002-7357079,7357373-7357444,735... 24 4.8
11_06_0437 - 23533218-23536382 28 5.4
06_03_0564 + 22218955-22219060,22219184-22219293,22222363-22223682 28 5.4
03_06_0263 - 32735092-32735985 28 5.4
03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689 28 5.4
01_01_0840 - 6557931-6558377 28 5.4
08_02_1310 - 26037025-26038074 28 7.2
06_03_1310 + 29238644-29240260 28 7.2
03_06_0244 + 32613914-32614666 28 7.2
02_04_0328 + 22076321-22077835 28 7.2
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 28 7.2
01_06_0128 - 26727484-26728383 28 7.2
01_01_0574 + 4263247-4263615,4263945-4263992,4264308-4264514,426... 28 7.2
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 27 9.5
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 27 9.5
10_08_1037 - 22477358-22478752 27 9.5
07_03_0007 - 12271560-12272207 27 9.5
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 27 9.5
06_02_0225 + 13257655-13260693 27 9.5
04_04_1106 - 30948626-30948724,30948841-30949176,30949231-309493... 27 9.5
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 27 9.5
01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 27 9.5
>11_01_0197 + 1554449-1555101,1555462-1555558
Length = 249
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +1
Query: 25 PGPRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQ 204
P PRP PAE +S + ++LRGLPY A E I+ F E+ + +
Sbjct: 132 PPPRPKKPAEDK-----------SSMEYTEVLKLRGLPYSATTEDIIKFFVEY--ELTEE 178
Query: 205 GVHMVFNAXGHPSGEAFIQ 261
VH+ + G +GEAF++
Sbjct: 179 NVHIAYRPDGKATGEAFVE 197
Score = 31.9 bits (69), Expect = 0.44
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP++ I F F +V ++ + G +GEAF+ S A
Sbjct: 35 VRLRGLPFDCDDLDIFKF---FVGLDIVD--CLLVHKNGRFTGEAFVVFPSAMQAEFAL- 88
Query: 298 QKHHRYMTFGKKQRYIEVFQC 360
H G+ RY+EVF+C
Sbjct: 89 --HRNRQNMGR--RYVEVFRC 105
>08_02_0763 + 20924057-20924848
Length = 263
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = -1
Query: 625 YRQAEESE*VILLQPVTLPASWFADGVEGGNSEQGRLGVSGSPNIRAA 482
+RQ EE+ +L QPVT A+ A VEGG G G GSP AA
Sbjct: 32 HRQDEETLEAVLRQPVTTTAA-AAAAVEGGGGGGGG-GAGGSPAAAAA 77
>05_06_0237 +
26618195-26618425,26618518-26618640,26619569-26619736,
26619824-26621497
Length = 731
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +1
Query: 133 LPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
+ YEA++ ++ F+E +++ V+ + +V+N HP+ +AF
Sbjct: 491 MTYEARLWNLKLFVEHYSRCESVREIVVVWNKGNHPTSDAF 531
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = -1
Query: 487 AAGLAASVPLLNSNKSKDRGTTPSGTSPGSRRPLAPCSCRRLNTGTPRCTVVSSRRSCTG 308
AA AA S ++ R TPS SPG R AP S R++ T + SS S +
Sbjct: 64 AAAEAAGSQARRSQSTERRPATPSRLSPGGSRAAAPSS--RISAPTSPSSAPSSPSSSSS 121
Query: 307 DAS 299
+S
Sbjct: 122 SSS 124
>12_02_1211 -
27033927-27034029,27034130-27034273,27034358-27034439,
27034536-27034690,27034865-27034945,27035397-27035458,
27035966-27036034,27036807-27036867,27037560-27037816
Length = 337
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = -1
Query: 517 LGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGSRRPLAPCSCRRLNTGTPRCT 338
L + SP A ++S+P +S+ S TT + S R + P S RR+ P
Sbjct: 7 LPLRASPPEVAKAFSSSIPASSSSSSSSSSTTTAAASLPLRAAVPPSSGRRI----PPLR 62
Query: 337 VVSSRRSCTGDAS 299
SS S G AS
Sbjct: 63 CASSSSSSQGSAS 75
>06_01_1070 + 8750260-8750335,8750432-8751311,8753719-8754646
Length = 627
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -1
Query: 580 VTLPASWFADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPG 401
V +P + G++ G S R+GV + ++ A +A V + GTT +GTSP
Sbjct: 431 VLVPLARRVTGLDRGISYLHRMGVGFAISVAATLVAGFVERHRRESAAAAGTTDAGTSPL 490
Query: 400 SRRPLAP 380
S L P
Sbjct: 491 SAYWLVP 497
>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
Length = 296
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Frame = -1
Query: 541 GGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGSRRPLAPCSCRRL 362
GG + + +R +AAS+ +L+ G +G G +R LAP +
Sbjct: 101 GGGAGAASSTAASQFTLREREVAASLLMLSGAHPARSG---AGKGKGKKRLLAPAAAAAP 157
Query: 361 NTGTPRCT----VVSSRRSCTGDASAGHRGKRWP 272
+ C V R TG A GH+ WP
Sbjct: 158 HHSPATCADHKCAVCHRGFATGQALGGHKRCHWP 191
>01_01_0179 +
1517379-1517721,1518092-1518376,1519462-1519699,
1519796-1519946,1520049-1520446,1520552-1520573
Length = 478
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 557 CGWCGGW***AGETGGVG*PQYTSGGVGSVGPIA 456
CGWCG W +G GG + GG G G A
Sbjct: 5 CGWCGRWRRSSGGRGGGADREANGGGGGGGGGAA 38
>02_05_0432 + 28936293-28936796,28937382-28939250
Length = 790
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 249 LAAGMTXGIENHVNSLHDNVLGEFFQKRQDVFNLGFIG*STQS 121
L+ G + G+E VNSLH L +++ F +GF G + +S
Sbjct: 699 LSGGNSEGVERIVNSLHTQSLTSKVKRKGRFFWIGFQGSNAES 741
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +3
Query: 348 GVPVFRRRHEHGANGRRDPGDVPEGVVPRSFDLLLFSNGTDAANPAARI 494
G PV R RHE PG P GV DL F N +++NPAA +
Sbjct: 873 GFPVQRHRHEEDVTDDVPPGFGP-GVARDEDDLPEF-NFVNSSNPAANV 919
>06_03_0178 + 17594062-17595576
Length = 504
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 547 VEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGSR 395
V GG++ + +R A +S + S ++ RGTTPS T+P +R
Sbjct: 432 VRGGSASPRTFSPAAQKFVRNAIAKSSRTIDESLRASYRGTTPSATTPKTR 482
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 562 WFADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPG 401
W DG NS+ R+ + P+I++ G+ AS + +++S + S G
Sbjct: 485 WVVDGEPPENSQWPRVPMLSDPSIQSTGVPASNVISKNDESNQKSGLTSNEDSG 538
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 234 SSQRRGIHSDGQRGQRFPLCPAEASPVHDLREETTVHRGVPVFRRRHEHG 383
S + IHS+G+ G+ + S + L ET G+ + HE+G
Sbjct: 12 SKKMEPIHSNGEAGEDKTIIIEPESDANKLEVETDARHGICEAHKAHEYG 61
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 430 GTTPSGTSPGS-RRPLAPCSCRRLNTGTPRCTVVSSRRSCTGDASAG 293
GT PS P S R+PL S + +GTP +SRR CT A G
Sbjct: 679 GTKPSPARPPSARKPLGQSSNANIISGTP-----TSRRVCTPMARKG 720
>03_02_1035 -
13557425-13557721,13557855-13558058,13558143-13558332,
13558450-13558841,13558931-13559023,13559297-13559500,
13559572-13559635,13559760-13559806,13559825-13559971,
13560243-13560335,13560420-13560599,13560993-13561128,
13561216-13561466,13561556-13561669,13561794-13561991,
13562050-13562110,13562921-13563210
Length = 986
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 559 FADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPL 458
FAD E G SE GV G+ +AG +++VP+
Sbjct: 687 FADTAETGYSESPSQGVDGASPSSSAGTSSNVPV 720
>07_01_0886 -
7356591-7356662,7357002-7357079,7357373-7357444,
7357511-7357600,7357669-7357783,7358509-7358639,
7358717-7358992,7360147-7360283,7360368-7360502,
7360958-7361325,7362111-7362229,7362295-7362339
Length = 545
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 13/61 (21%), Positives = 25/61 (40%)
Frame = -1
Query: 406 PGSRRPLAPCSCRRLNTGTPRCTVVSSRRSCTGDASAGHRGKRWPRCPSE*MPRRWDDXG 227
P P P + + + + V+ + R+ + G+R P+C + + DD G
Sbjct: 184 PIKTEPKDPYTTEAIQSSRDKVVVLQAARAIVSISHIMDDGQRRPQCTGIIIKQWSDDTG 243
Query: 226 H 224
H
Sbjct: 244 H 244
Score = 23.0 bits (47), Expect(2) = 4.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -1
Query: 499 PNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGSRRPLAP 380
P I A LL + GTT S +P RRP P
Sbjct: 108 PTIALLTEEAKQRLLRAEGQTSPGTTVSPFAPAPRRPQYP 147
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 475 AASVPLLNSNKSKDRGTTPSGTSPGSRRPLAPC 377
A + P+ N ++ D P G +P R L PC
Sbjct: 893 ATAEPVANEGEANDASAKPKGEAPVGRLQLLPC 925
>06_03_0564 + 22218955-22219060,22219184-22219293,22222363-22223682
Length = 511
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVE 156
P+ +PG APA +P A P H + G R E QVE
Sbjct: 44 PHPNPGDAEAAPAAVAIPPAPAPLHDLAQGAEAASAAGRSNEKEEQVE 91
>03_06_0263 - 32735092-32735985
Length = 297
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 307 HRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGPLTYYYSAMGPTL 474
HR + F C DD + V+T + P++++ L YS M TL
Sbjct: 213 HRVPRLASSLSFAGRFYCVSDDADAVMTVKTSENQPPRLVAAAELAIQYSPMMDTL 268
>03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689
Length = 328
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 547 VEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSG-TSPGSRRPLAP 380
V GG + V G AAG+ +VP ++S R + + T PGS PLAP
Sbjct: 132 VPGGGASAAGTVVPGD-GASAAGIRTTVPGIDSLGEVGRRSPKNAITRPGSTMPLAP 187
>01_01_0840 - 6557931-6558377
Length = 148
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = -1
Query: 436 DRGTTPSGTSPGSRRPLAPCSCRRLNTGTPRCTVVSSRRSCTGDASAGHRGKRWPRCPSE 257
D G + S S R P P L + C V + S T D ++ G+R PRC
Sbjct: 3 DSGGSRSAASSSLRAPSMPPPLLCLPSSPLPCVVEVAMTSSTPDLASSSTGRR-PRC--- 58
Query: 256 *MPRRWDDXGH*KPCELLARQCSW 185
GH + C LL +W
Sbjct: 59 ---------GHRRRCHLLLLDAAW 73
>08_02_1310 - 26037025-26038074
Length = 349
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +1
Query: 154 EHILTFLEEFAKNIVVQGVHMVF--NAXGHPS---GEAFIQMDSEASAFLCAQQKHHRYM 318
E++ L+ ++ V+ + F + GHPS ++F+ + + + +M
Sbjct: 56 EYLSIKLDLVTRSTNVRAIFAAFLVHLDGHPSPVHAKSFVAVYPLGAGGRGGGKAAAGWM 115
Query: 319 TFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
F + + F SGD V+ G + P+ SP+ LSP P
Sbjct: 116 YFASRSELEKKF-VSGDGWVTVVCGVLIPSDSPQALSPPP 154
>06_03_1310 + 29238644-29240260
Length = 538
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 511 VSGSPNIR--AAGLAASVPLLNSNKSKDRGTTPSGTSPGSRRPLAP 380
+ G+P R A AA+ + +K++ + T P+ PG R PLAP
Sbjct: 335 IPGAPAQRPPAQCAAAAAHPFDCSKAQCQATPPTTRRPGGRTPLAP 380
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 7.2
Identities = 26/80 (32%), Positives = 34/80 (42%)
Frame = -1
Query: 520 RLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGSRRPLAPCSCRRLNTGTPRC 341
R V+GSP +R G A + ++ RG TP G G RR A C+ G R
Sbjct: 59 RESVTGSPRVRPRGRAVREARAVAARTPRRG-TPGG-GGGVRR--AACAGLGPIRGAERI 114
Query: 340 TVVSSRRSCTGDASAGHRGK 281
S G+A G RG+
Sbjct: 115 RARPSSPDDGGEAKEGWRGE 134
>02_04_0328 + 22076321-22077835
Length = 504
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 267 QRGQRFPLCPAEASPVHDLREETTVHRGVPVFRRRHE 377
+RG P P P + ET H+G P +R+ H+
Sbjct: 248 ERGLAPPWWPTGEEPWWGTQGETQAHQGAPPYRKPHD 284
>02_03_0273 + 17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 553 DGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDR 431
DG+E E + GV G+ + LA V +L + + K+R
Sbjct: 883 DGIEDVKKEAAKAGVRGAESKFINALARQVSILRAEREKER 923
>01_06_0128 - 26727484-26728383
Length = 299
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 75 QRHWQKTFSGSRGPWTGVLVWL 10
+R W K + R PW GV VWL
Sbjct: 108 RRPWGKFAAEIRDPWRGVRVWL 129
>01_01_0574 +
4263247-4263615,4263945-4263992,4264308-4264514,
4264670-4264826,4264958-4265041,4265785-4265909,
4268100-4268218,4268535-4268619,4269087-4269134
Length = 413
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +1
Query: 1 ESYKPNQHPGPRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQV 153
E PN HP P PPAPA V PQ + + VRL+ +P E V
Sbjct: 21 EVVAPN-HPPPAPPAPA----AVPAPPQPQGEARYRRPLVRLQAVPNEDHV 66
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 327 PEGHVPVMLLLGTEESAGLAVHLNECLAAGM 235
PEG+VP+ ++ G + L VH N LAA +
Sbjct: 150 PEGYVPITVIAGFNKIKAL-VHNNSMLAAAL 179
>11_04_0331 +
16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 393 RRDPGDVPEGVVPRSFDLLLFSNGTDAANPAARI 494
+ PG VP G +PR +++L ++ D A P I
Sbjct: 430 QESPGIVPAGRLPRYKEVILLNDLIDCARPGEEI 463
>10_08_1037 - 22477358-22478752
Length = 464
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 22 HPGPRPPAPAEGLLP 66
HP P PP P+ G+LP
Sbjct: 366 HPPPPPPVPSPGILP 380
>07_03_0007 - 12271560-12272207
Length = 215
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 RTSQTSTPVHGPRLPLKVFCQWRWCHSTLSPLEPPK-TALDCVDYPMKPRLNTS*RFWKN 181
R + + P P LP + + C S+LSP +PP +A + L+ S RF +
Sbjct: 13 RRRRCTIPTLPPLLPRLLSSSFSHCPSSLSPAKPPSLSARLSFVFDQLDALDRS-RFSDH 71
Query: 182 SPRTLSCKEFTWFSMPXVIP 241
S R + + + P +P
Sbjct: 72 SARDAALRRIQSWRRPAALP 91
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 457 LNSNKSKDRGTTPSGTSPG-SRRPLAPCSCRRLN-TGTPRCTVVSSRRSCTGDASAGHRG 284
+ N+ R GT P S P++ CS + + G+P +SS RS +G A+
Sbjct: 212 ITDNEESPRLDDIYGTPPQLSSLPVSSCSNQSVQKAGSPVKVQLSSPRSSSGSATTNKAR 271
Query: 283 KRW 275
RW
Sbjct: 272 LRW 274
>06_02_0225 + 13257655-13260693
Length = 1012
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 202 QGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIE 348
QG + A G SG + D E A A H FGK + +IE
Sbjct: 599 QGSEAMPGAGGGRSGGGSVGGDHELQALSTAHPDHEAPQKFGKSKMFIE 647
>04_04_1106 -
30948626-30948724,30948841-30949176,30949231-30949353,
30949425-30949517,30949603-30949806,30949884-30950134,
30951011-30952391,30952737-30953174
Length = 974
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 425 NTFGDVAGVTPPVSTMFMSSPEHW 354
N F +V TPP S + MS PEH+
Sbjct: 533 NEFDNVQLTTPPPSDIDMSDPEHF 556
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 25 PGPRPPAPAEGLLPVALVPQ 84
P P PP P +G P+ L PQ
Sbjct: 289 PPPTPPPPEDGCSPLPLTPQ 308
>01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942
Length = 1020
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 254 SFRWTARPALSSVPSRSITGT*PSGRNNGT 343
S RW R A +PS ++TGT P N T
Sbjct: 63 SHRWPTRVAALDLPSSNLTGTLPPAVGNLT 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,616,780
Number of Sequences: 37544
Number of extensions: 545434
Number of successful extensions: 2302
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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