Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0786
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif prote... 132 1e-30
BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif prote... 130 4e-30
BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein. 130 4e-30
BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein. 125 1e-28
BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif prote... 111 3e-24
AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA. prot... 111 3e-24
AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens ... 96 8e-20
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 59 2e-08
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 59 2e-08
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 59 2e-08
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 59 2e-08
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 58 2e-08
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 58 2e-08
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 58 2e-08
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 56 8e-08
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 56 8e-08
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 56 8e-08
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 56 8e-08
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 56 8e-08
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 56 8e-08
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 56 8e-08
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 56 1e-07
BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein. 56 1e-07
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein. 56 1e-07
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 50 9e-06
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 50 9e-06
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 50 9e-06
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 50 9e-06
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 50 9e-06
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 50 9e-06
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 50 9e-06
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 50 9e-06
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 44 5e-04
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 44 5e-04
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 44 5e-04
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 44 5e-04
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 44 5e-04
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 44 5e-04
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 32 2.0
J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein. 32 2.0
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 32 2.0
BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein. 32 2.0
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 32 2.0
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 32 2.0
AK025901-1|BAB15275.1| 185|Homo sapiens protein ( Homo sapiens ... 31 2.6
X63128-1|CAA44839.1| 513|Homo sapiens activin receptor protein. 31 3.4
X62381-1|CAA44245.1| 513|Homo sapiens activin receptor protein. 31 3.4
M93415-1|AAA35504.1| 513|Homo sapiens activin type II receptor ... 31 3.4
D31770-1|BAA06548.1| 513|Homo sapiens activin typeII A receptor... 31 3.4
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 3.4
BC069707-1|AAH69707.1| 513|Homo sapiens activin A receptor, typ... 31 3.4
BC067418-1|AAH67418.1| 513|Homo sapiens activin A receptor, typ... 31 3.4
BC067417-1|AAH67417.1| 513|Homo sapiens activin A receptor, typ... 31 3.4
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 3.4
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 3.4
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 3.4
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 3.4
AC009480-2|AAX93050.1| 513|Homo sapiens unknown protein. 31 3.4
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 3.4
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 31 4.6
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 31 4.6
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 31 4.6
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 31 4.6
AF062181-1|AAC18217.1| 139|Homo sapiens immunoglobulin heavy ch... 31 4.6
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 31 4.6
BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein. 30 6.0
AL713647-1|CAD28458.1| 1232|Homo sapiens hypothetical protein pr... 30 6.0
>BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif protein
35A protein.
Length = 677
Score = 132 bits (319), Expect = 1e-30
Identities = 72/158 (45%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +1
Query: 31 PRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGV 210
P P P ++PV +PQ + +DC+RLRGLPY A +E IL FL EFA +I GV
Sbjct: 420 PLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGV 477
Query: 211 HMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLT 390
HMV N G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL
Sbjct: 478 HMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLM 533
Query: 391 GGV---TPATSPKVLSPGPLTYYYSAMGPTLPTPPLVY 495
GG + P LSP +Y + A +PT +Y
Sbjct: 534 GGTLNRNGLSPPPCLSPP--SYTFPAPAAVIPTEAAIY 569
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VR RGLP+++ + I F + NI G + NA G +GEA ++ SE L Q
Sbjct: 227 VRARGLPWQSSDQDIARFFKGL--NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ 284
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ H T RYIEV++ +G+D + + GG +
Sbjct: 285 RHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 313
Score = 41.9 bits (94), Expect = 0.002
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAK-NIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
VR+RGLP+ A E ++ F + +G+ V G P+G+AF+ E A A
Sbjct: 328 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYA-QNA 386
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH + GK RYIE+F+ + ++ VL
Sbjct: 387 LRKHKDLL--GK--RYIELFRSTAAEVQQVL 413
>BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif protein
35A protein.
Length = 681
Score = 130 bits (314), Expect = 4e-30
Identities = 72/160 (45%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Frame = +1
Query: 31 PRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGV 210
P P P ++PV +PQ + +DC+RLRGLPY A +E IL FL EFA +I GV
Sbjct: 420 PLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGV 477
Query: 211 HMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLT 390
HMV N G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL
Sbjct: 478 HMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLM 533
Query: 391 GGV--TPATSP---KVLSPGPLTYYYSAMGPTLPTPPLVY 495
GG SP K+ P +Y + A +PT +Y
Sbjct: 534 GGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 573
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VR RGLP+++ + I F + NI G + NA G +GEA ++ SE L Q
Sbjct: 227 VRARGLPWQSSDQDIARFFKGL--NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ 284
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ H T RYIEV++ +G+D + + GG +
Sbjct: 285 RHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 313
Score = 41.9 bits (94), Expect = 0.002
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAK-NIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
VR+RGLP+ A E ++ F + +G+ V G P+G+AF+ E A A
Sbjct: 328 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYA-QNA 386
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH + GK RYIE+F+ + ++ VL
Sbjct: 387 LRKHKDLL--GK--RYIELFRSTAAEVQQVL 413
>BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein.
Length = 656
Score = 130 bits (314), Expect = 4e-30
Identities = 72/160 (45%), Positives = 92/160 (57%), Gaps = 5/160 (3%)
Frame = +1
Query: 31 PRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGV 210
P P P ++PV +PQ + +DC+RLRGLPY A +E IL FL EFA +I GV
Sbjct: 468 PLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGV 525
Query: 211 HMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLT 390
HMV N G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL
Sbjct: 526 HMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLM 581
Query: 391 GGV--TPATSP---KVLSPGPLTYYYSAMGPTLPTPPLVY 495
GG SP K+ P +Y + A +PT +Y
Sbjct: 582 GGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIY 621
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VR RGLP+++ + I F + NI G + NA G +GEA ++ SE L Q
Sbjct: 275 VRARGLPWQSSDQDIARFFKGL--NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ 332
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ H T RYIEV++ +G+D + + GG +
Sbjct: 333 RHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 361
Score = 41.9 bits (94), Expect = 0.002
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAK-NIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
VR+RGLP+ A E ++ F + +G+ V G P+G+AF+ E A A
Sbjct: 376 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYA-QNA 434
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH + GK RYIE+F+ + ++ VL
Sbjct: 435 LRKHKDLL--GK--RYIELFRSTAAEVQQVL 461
>BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein.
Length = 392
Score = 125 bits (302), Expect = 1e-28
Identities = 63/122 (51%), Positives = 78/122 (63%)
Frame = +1
Query: 31 PRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGV 210
P P P ++PV +PQ + +DC+RLRGLPY A +E IL FL EFA +I GV
Sbjct: 267 PLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGV 324
Query: 211 HMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLT 390
HMV N G PSG+AFIQM S AF+ AQ+ H + M K RY+EVFQCS ++MN VL
Sbjct: 325 HMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNM----KDRYVEVFQCSAEEMNFVLM 380
Query: 391 GG 396
GG
Sbjct: 381 GG 382
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VR RGLP+++ + I F + NI G + NA G +GEA ++ SE L Q
Sbjct: 74 VRARGLPWQSSDQDIARFFKGL--NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ 131
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ H T RYIEV++ +G+D + + GG +
Sbjct: 132 RHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 160
Score = 41.9 bits (94), Expect = 0.002
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAK-NIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
VR+RGLP+ A E ++ F + +G+ V G P+G+AF+ E A A
Sbjct: 175 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYA-QNA 233
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH + GK RYIE+F+ + ++ VL
Sbjct: 234 LRKHKDLL--GK--RYIELFRSTAAEVQQVL 260
>BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif protein
35B protein.
Length = 717
Score = 111 bits (266), Expect = 3e-24
Identities = 71/157 (45%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Frame = +1
Query: 28 GPRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQG 207
GP P LLP+ + GT +DCVRLRGLPY A +E IL+FL E A +I G
Sbjct: 441 GPLLPTLTAPLLPIPFP----LAPGTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHG 496
Query: 208 VHMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
VHMV N G PSG+AFIQM S A AQ+ H + M K+RY+EV CS ++M+ VL
Sbjct: 497 VHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM----KERYVEVVPCSTEEMSRVL 552
Query: 388 TGGV--TPATSP---KVLSPGPLTYYYSAMGPTL-PT 480
GG SP K+ P TY PTL PT
Sbjct: 553 MGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPT 589
Score = 49.2 bits (112), Expect = 1e-05
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQ-MDSEASAFLCA 294
VR RGLP+++ + + F + N+ GV + NA G +GEA I+ +DSE
Sbjct: 249 VRARGLPWQSSDQDVARFFKGL--NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ 306
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ KHH + RYIEV++ +G++ + + GG +
Sbjct: 307 RHKHHMGV------RYIEVYKATGEEF-VKIAGGTS 335
Score = 43.2 bits (97), Expect = 8e-04
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFL-EEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
+RLRGLP+ A +L FL E +G+ V + G P+G+AF E A A
Sbjct: 350 LRLRGLPFSAGPTDVLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QA 407
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL----TGGVTPA-TSPKVLSPGPL 441
+ H+ M GK RYIE+F+ + ++ VL +G + P T+P + P PL
Sbjct: 408 ALRRHKGM-LGK--RYIELFRSTAAEVQQVLNRYASGPLLPTLTAPLLPIPFPL 458
>AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA.
protein.
Length = 727
Score = 111 bits (266), Expect = 3e-24
Identities = 71/157 (45%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Frame = +1
Query: 28 GPRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQG 207
GP P LLP+ + GT +DCVRLRGLPY A +E IL+FL E A +I G
Sbjct: 451 GPLLPTLTAPLLPIPFP----LAPGTGRDCVRLRGLPYTATIEDILSFLGEAAADIRPHG 506
Query: 208 VHMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
VHMV N G PSG+AFIQM S A AQ+ H + M K+RY+EV CS ++M+ VL
Sbjct: 507 VHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVM----KERYVEVVPCSTEEMSRVL 562
Query: 388 TGGV--TPATSP---KVLSPGPLTYYYSAMGPTL-PT 480
GG SP K+ P TY PTL PT
Sbjct: 563 MGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPT 599
Score = 49.2 bits (112), Expect = 1e-05
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQ-MDSEASAFLCA 294
VR RGLP+++ + + F + N+ GV + NA G +GEA I+ +DSE
Sbjct: 259 VRARGLPWQSSDQDVARFFKGL--NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQ 316
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ KHH + RYIEV++ +G++ + + GG +
Sbjct: 317 RHKHHMGV------RYIEVYKATGEEF-VKIAGGTS 345
Score = 43.2 bits (97), Expect = 8e-04
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFL-EEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
+RLRGLP+ A +L FL E +G+ V + G P+G+AF E A A
Sbjct: 360 LRLRGLPFSAGPTDVLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELA--QA 417
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL----TGGVTPA-TSPKVLSPGPL 441
+ H+ M GK RYIE+F+ + ++ VL +G + P T+P + P PL
Sbjct: 418 ALRRHKGM-LGK--RYIELFRSTAAEVQQVLNRYASGPLLPTLTAPLLPIPFPL 468
>AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ20171 fis, clone COL09761. ).
Length = 358
Score = 96.3 bits (229), Expect = 8e-20
Identities = 47/94 (50%), Positives = 59/94 (62%)
Frame = +1
Query: 31 PRPPAPAEGLLPVALVPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGV 210
P P P ++PV +PQ + +DC+RLRGLPY A +E IL FL EFA +I GV
Sbjct: 260 PLIPLPTPPIIPV--LPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGV 317
Query: 211 HMVFNAXGHPSGEAFIQMDSEASAFLCAQQKHHR 312
HMV N G PSG+AFIQM S AF+ AQ+ H +
Sbjct: 318 HMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKK 351
Score = 50.8 bits (116), Expect = 4e-06
Identities = 32/95 (33%), Positives = 49/95 (51%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VR RGLP+++ + I F + NI G + NA G +GEA ++ SE L Q
Sbjct: 67 VRARGLPWQSSDQDIARFFKGL--NIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQ 124
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVT 402
+ H T RYIEV++ +G+D + + GG +
Sbjct: 125 RHKHHMGT-----RYIEVYKATGEDF-LKIAGGTS 153
Score = 41.9 bits (94), Expect = 0.002
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAK-NIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
VR+RGLP+ A E ++ F + +G+ V G P+G+AF+ E A A
Sbjct: 168 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYA-QNA 226
Query: 295 QQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH + GK RYIE+F+ + ++ VL
Sbjct: 227 LRKHKDLL--GK--RYIELFRSTAAEVQQVL 253
>U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein.
Length = 449
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + ++ F + G+ ++ G PSGEAF++++SE
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 EEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSPDTA 108
Score = 43.2 bits (97), Expect = 8e-04
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFS--GLEIVPNGMTLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCS 363
A A +KH + RYIE+F+ S
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSS 187
Score = 33.9 bits (74), Expect = 0.49
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F + VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSP----LNPMRVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMAKDKANM----QHRYVELF 360
>BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + ++ F + G+ ++ G PSGEAF++++SE
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 EEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSPDTA 108
Score = 43.2 bits (97), Expect = 8e-04
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFS--GLEIVPNGMTLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCS 363
A A +KH + RYIE+F+ S
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSS 187
Score = 33.9 bits (74), Expect = 0.49
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F + VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSP----LNPMRVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMAKDKANM----QHRYVELF 360
>BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + ++ F + G+ ++ G PSGEAF++++SE
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 EEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSPDTA 108
Score = 43.2 bits (97), Expect = 8e-04
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFS--GLEIVPNGMTLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCS 363
A A +KH + RYIE+F+ S
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSS 187
Score = 33.9 bits (74), Expect = 0.49
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F + VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSP----LNPMRVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMAKDKANM----QHRYVELF 360
>AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + ++ F + G+ ++ G PSGEAF++++SE
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 EEVKLALKKDRE---TMG--HRYVEVFKSNSVEMDWVLKHTGPNSPDTA 108
Score = 43.2 bits (97), Expect = 8e-04
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFS--GLEIVPNGMTLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCS 363
A A +KH + RYIE+F+ S
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSS 187
Score = 33.9 bits (74), Expect = 0.49
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F + VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSP----LNPMRVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMAKDKANM----QHRYVELF 360
>L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein.
Length = 449
Score = 58.4 bits (135), Expect = 2e-08
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + + F + QG+ ++ G PSGEAF++++SE
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 DEVKLALKKDRE---TMG--HRYVEVFKSNNVEMDWVLKHTGPNSPDTA 108
Score = 44.0 bits (99), Expect = 5e-04
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCS 363
A A +KH + RYIE+F+ S
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSS 187
Score = 34.7 bits (76), Expect = 0.28
Identities = 27/84 (32%), Positives = 37/84 (44%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMSKDKANM----QHRYVELF 360
>CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein.
Length = 449
Score = 58.4 bits (135), Expect = 2e-08
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + + F + QG+ ++ G PSGEAF++++SE
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 DEVKLALKKDRE---TMG--HRYVEVFKSNNVEMDWVLKHTGPNSPDTA 108
Score = 46.8 bits (106), Expect = 6e-05
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
A A +KH + RYIE+F+ SG ++
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSSGAEV 191
Score = 34.7 bits (76), Expect = 0.28
Identities = 27/84 (32%), Positives = 37/84 (44%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMSKDKANM----QHRYVELF 360
>BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein.
Length = 449
Score = 58.4 bits (135), Expect = 2e-08
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 TSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSE 273
T G V++RGLP+ + + F + QG+ ++ G PSGEAF++++SE
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 274 ASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDMNMVL--TGGVTPATS 414
L ++ T G RY+EVF+ + +M+ VL TG +P T+
Sbjct: 65 DEVKLALKKDRE---TMG--HRYVEVFKSNNVEMDWVLKHTGPNSPDTA 108
Score = 44.0 bits (99), Expect = 5e-04
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 TAKD-CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEAS 279
TA D VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+
Sbjct: 107 TANDGFVRLRGLPFGCSKEEIVQFFSGL--EIVPNGITLPVDFQGRSTGEAFVQFASQEI 164
Query: 280 AFLCAQQKHHRYMTFGKKQRYIEVFQCS 363
A A +KH + RYIE+F+ S
Sbjct: 165 AEK-ALKKHKERI----GHRYIEIFKSS 187
Score = 34.7 bits (76), Expect = 0.28
Identities = 27/84 (32%), Positives = 37/84 (44%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYRATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEDA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RY+E+F
Sbjct: 342 -VAAMSKDKANM----QHRYVELF 360
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFKSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFKSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFRSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFKSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFKSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFKSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 56.4 bits (130), Expect = 8e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V+LRGLP+ VE + FL + + GVH ++ G SGEAF+++ SE + A
Sbjct: 13 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKM-AL 71
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+K M RYIEVF+ +M+ VL
Sbjct: 72 KKDRESM----GHRYIEVFKSHRTEMDWVL 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 37/107 (34%), Positives = 50/107 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLP+ E I+ F IV G+ + + G +GEAF+Q S+ A A
Sbjct: 113 VRLRGLPFGCTKEEIVQFFS--GLEIVPNGITLPVDPEGKITGEAFVQFASQELAEK-AL 169
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVLTGGVTPATSPKVLSPGP 438
KH + RYIEVF+ S ++ V + P V PGP
Sbjct: 170 GKHKERI----GHRYIEVFKSSQEE---VRSYSDPPLKFMSVQRPGP 209
Score = 35.9 bits (79), Expect = 0.12
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
T CV +RGLPY+A I F N V VH+ G +GEA ++ + A
Sbjct: 286 TTGHCVHMRGLPYKATENDIYNFFSPL--NPV--RVHIEIGPDGRVTGEADVEFATHEEA 341
Query: 283 FLCAQQKHHRYMTFGKKQRYIEVF 354
+ A K M + RYIE+F
Sbjct: 342 -VAAMSKDRANM----QHRYIELF 360
>U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1
protein.
Length = 424
Score = 55.6 bits (128), Expect = 1e-07
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
+R +GLP+ +E +L F + G+H + N G G+A I+M+SE A
Sbjct: 96 IRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDV-QKAL 154
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH YM QRY+EV++ + +D++ ++
Sbjct: 155 EKHRMYM----GQRYVEVYEINNEDVDALM 180
Score = 33.1 bits (72), Expect = 0.86
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V +RGLP++A + I+ F FA V+ + M +++ G +GEA + ++ A + A
Sbjct: 347 VHMRGLPFQANAQDIINF---FAPLKPVR-ITMEYSSSGKATGEADVHFETHEDA-VAAM 401
Query: 298 QKHHRYMTFGKKQRYIEVF 354
K ++ RYIE+F
Sbjct: 402 LKDRSHV----HHRYIELF 416
Score = 31.5 bits (68), Expect = 2.6
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLPY + I+ F FA +V ++ +GEA++Q + A A
Sbjct: 196 VRLRGLPYSCNEKDIVDF---FAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQ-AL 251
Query: 298 QKHHRYMTFGKKQRYIEVF 354
KH + RYIE+F
Sbjct: 252 LKHREEI----GNRYIEIF 266
>BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein.
Length = 435
Score = 55.6 bits (128), Expect = 1e-07
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
+R +GLP+ +E +L F + G+H + N G G+A I+M+SE A
Sbjct: 152 IRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDV-QKAL 210
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH YM QRY+EV++ + +D++ ++
Sbjct: 211 EKHRMYM----GQRYVEVYEINNEDVDALM 236
Score = 31.5 bits (68), Expect = 2.6
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXG-HPSGEAFIQMDSEASAFLCA 294
VRLRGLPY + I+ F NIV + V + G +GEA++Q + A A
Sbjct: 252 VRLRGLPYSCNEKDIVDFFA--GLNIVY--ITFVMDYRGRRKTGEAYVQFEEPEMANQ-A 306
Query: 295 QQKHHRYMTFGKKQRYIEVF 354
KH + RYIE+F
Sbjct: 307 LLKHREEI----GNRYIEIF 322
>AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ45225 fis, clone BRCAN2020331, highly similar
to G-rich sequence factor-1. ).
Length = 447
Score = 55.6 bits (128), Expect = 1e-07
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
+R +GLP+ +E +L F + G+H + N G G+A I+M+SE A
Sbjct: 119 IRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDV-QKAL 177
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH YM QRY+EV++ + +D++ ++
Sbjct: 178 EKHRMYM----GQRYVEVYEINNEDVDALM 203
Score = 33.1 bits (72), Expect = 0.86
Identities = 27/79 (34%), Positives = 37/79 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLPY E I+ F FA +V ++ +GEA++Q + A A
Sbjct: 219 VRLRGLPYSCNEEDIVDF---FAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQ-AL 274
Query: 298 QKHHRYMTFGKKQRYIEVF 354
KH + RYIE+F
Sbjct: 275 LKHREEI----GNRYIEIF 289
Score = 33.1 bits (72), Expect = 0.86
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V +RGLP++A + I+ F FA V+ + M +++ G +GEA + ++ A + A
Sbjct: 370 VHMRGLPFQANAQDIINF---FAPLKPVR-ITMEYSSSGKATGEADVHFETHEDA-VAAM 424
Query: 298 QKHHRYMTFGKKQRYIEVF 354
K ++ RYIE+F
Sbjct: 425 LKDRSHV----HHRYIELF 439
>AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ33436 fis, clone BRACE2021478, highly similar to
G-RICH SEQUENCE FACTOR-1. ).
Length = 415
Score = 55.6 bits (128), Expect = 1e-07
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
+R +GLP+ +E +L F + G+H + N G G+A I+M+SE A
Sbjct: 87 IRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDV-QKAL 145
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH YM QRY+EV++ + +D++ ++
Sbjct: 146 EKHRMYM----GQRYVEVYEINNEDVDALM 171
Score = 33.1 bits (72), Expect = 0.86
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
V +RGLP++A + I+ F FA V+ + M +++ G +GEA + ++ A + A
Sbjct: 338 VHMRGLPFQANAQDIINF---FAPLKPVR-ITMEYSSSGKATGEADVHFETHEDA-VAAM 392
Query: 298 QKHHRYMTFGKKQRYIEVF 354
K ++ RYIE+F
Sbjct: 393 LKDRSHV----HHRYIELF 407
Score = 31.5 bits (68), Expect = 2.6
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLPY + I+ F FA +V ++ +GEA++Q + A A
Sbjct: 187 VRLRGLPYSCNEKDIVDF---FAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQ-AL 242
Query: 298 QKHHRYMTFGKKQRYIEVF 354
KH + RYIE+F
Sbjct: 243 LKHREEI----GNRYIEIF 257
>AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein.
Length = 435
Score = 55.6 bits (128), Expect = 1e-07
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
+R +GLP+ +E +L F + G+H + N G G+A I+M+SE A
Sbjct: 152 IRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDV-QKAL 210
Query: 298 QKHHRYMTFGKKQRYIEVFQCSGDDMNMVL 387
+KH YM QRY+EV++ + +D++ ++
Sbjct: 211 EKHRMYM----GQRYVEVYEINNEDVDALM 236
Score = 31.5 bits (68), Expect = 2.6
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +1
Query: 118 VRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCAQ 297
VRLRGLPY + I+ F FA +V ++ +GEA++Q + A A
Sbjct: 252 VRLRGLPYSCNEKDIVDF---FAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQ-AL 307
Query: 298 QKHHRYMTFGKKQRYIEVF 354
KH + RYIE+F
Sbjct: 308 LKHREEI----GNRYIEIF 322
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 431 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 487
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 488 LCRHKQYM 495
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 541 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 598
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +1
Query: 115 CVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASAFLCA 294
CV L+GLP+EA+ +H++ F ++ +IV +++ + G +GE F++ +EA + A
Sbjct: 451 CVYLKGLPFEAENKHVIDFFKKL--DIVEDSIYIAYGPNGKATGEGFVEFRNEAD-YKAA 507
Query: 295 QQKHHRYM 318
+H +YM
Sbjct: 508 LCRHKQYM 515
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 103 TAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAFIQMDSEASA 282
+AK C + +P+ +L FLE + VH++ + G G+A +Q +E A
Sbjct: 561 SAKVCAHITNIPFSITKMDVLQFLEGIP--VDENAVHVLVDNNGQGLGQALVQFKNEDDA 618
>L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein.
Length = 346
Score = 44.0 bits (99), Expect = 5e-04
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +1
Query: 76 VPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
V +H + + VRLRGLP+ E I+ F + IV G+ + + G +GEAF
Sbjct: 4 VMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQ--GLEIVPNGITLTMDYQGRSTGEAF 61
Query: 256 IQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
+Q S+ A A KH + RYIE+F+ S ++
Sbjct: 62 VQFASKEIA-ENALGKHKERI----GHRYIEIFRSSRSEI 96
>BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 (2H9) protein.
Length = 331
Score = 44.0 bits (99), Expect = 5e-04
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +1
Query: 76 VPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
V +H + + VRLRGLP+ E I+ F + IV G+ + + G +GEAF
Sbjct: 4 VMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQ--GLEIVPNGITLTMDYQGRSTGEAF 61
Query: 256 IQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
+Q S+ A A KH + RYIE+F+ S ++
Sbjct: 62 VQFASKEIA-ENALGKHKERI----GHRYIEIFRSSRSEI 96
>AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 isoform a variant protein.
Length = 346
Score = 44.0 bits (99), Expect = 5e-04
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +1
Query: 76 VPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
V +H + + VRLRGLP+ E I+ F + IV G+ + + G +GEAF
Sbjct: 4 VMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQ--GLEIVPNGITLTMDYQGRSTGEAF 61
Query: 256 IQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
+Q S+ A A KH + RYIE+F+ S ++
Sbjct: 62 VQFASKEIA-ENALGKHKERI----GHRYIEIFRSSRSEI 96
>AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 44.0 bits (99), Expect = 5e-04
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +1
Query: 76 VPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
V +H + + VRLRGLP+ E I+ F + IV G+ + + G +GEAF
Sbjct: 4 VMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQ--GLEIVPNGITLTMDYQGRSTGEAF 61
Query: 256 IQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
+Q S+ A A KH + RYIE+F+ S ++
Sbjct: 62 VQFASKEIA-ENALGKHKERI----GHRYIEIFRSSRSEI 96
>AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 44.0 bits (99), Expect = 5e-04
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +1
Query: 76 VPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
V +H + + VRLRGLP+ E I+ F + IV G+ + + G +GEAF
Sbjct: 4 VMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQ--GLEIVPNGITLTMDYQGRSTGEAF 61
Query: 256 IQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
+Q S+ A A KH + RYIE+F+ S ++
Sbjct: 62 VQFASKEIA-ENALGKHKERI----GHRYIEIFRSSRSEI 96
>AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein.
Length = 346
Score = 44.0 bits (99), Expect = 5e-04
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +1
Query: 76 VPQHVITSGTAKDCVRLRGLPYEAQVEHILTFLEEFAKNIVVQGVHMVFNAXGHPSGEAF 255
V +H + + VRLRGLP+ E I+ F + IV G+ + + G +GEAF
Sbjct: 4 VMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQ--GLEIVPNGITLTMDYQGRSTGEAF 61
Query: 256 IQMDSEASAFLCAQQKHHRYMTFGKKQRYIEVFQCSGDDM 375
+Q S+ A A KH + RYIE+F+ S ++
Sbjct: 62 VQFASKEIA-ENALGKHKERI----GHRYIEIFRSSRSEI 96
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 553 DGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 380
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 325
>J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein.
Length = 463
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 553 DGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 380
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 325
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 31.9 bits (69), Expect = 2.0
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGT--SPG 401
LP + A G++GG QG G GSP R + A L P+G +PG
Sbjct: 1034 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPGPQGPPGPAGEKGAPG 1093
Query: 400 SRRPLAP 380
+ P P
Sbjct: 1094 EKGPQGP 1100
>BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 553 DGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 380
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 83 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 142
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 553 DGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 380
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 114 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 173
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 553 DGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGT--SPGSRRPLAP 380
DG G N G +G +GSP R A +P L ++ P G +PGS+ P
Sbjct: 269 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGP 328
>AK025901-1|BAB15275.1| 185|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22248 fis, clone HRC02668. ).
Length = 185
Score = 31.5 bits (68), Expect = 2.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 331 KQRYIEVFQCSGDDMNMVLTGG 396
K+RY+EV CS ++M+ VL GG
Sbjct: 2 KERYVEVVPCSTEEMSRVLMGG 23
>X63128-1|CAA44839.1| 513|Homo sapiens activin receptor protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>X62381-1|CAA44245.1| 513|Homo sapiens activin receptor protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>M93415-1|AAA35504.1| 513|Homo sapiens activin type II receptor
protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>D31770-1|BAA06548.1| 513|Homo sapiens activin typeII A receptor
precursor protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGLAASVPLL-NSNKSKDRGTTPSGTSPG 401
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 918 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 977
Query: 400 SRRPLAP 380
+ P P
Sbjct: 978 EKGPQGP 984
>BC069707-1|AAH69707.1| 513|Homo sapiens activin A receptor, type
IIA, precursor protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>BC067418-1|AAH67418.1| 513|Homo sapiens activin A receptor, type
IIA, precursor protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>BC067417-1|AAH67417.1| 513|Homo sapiens activin A receptor, type
IIA protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGLAASVPLL-NSNKSKDRGTTPSGTSPG 401
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 1034 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1093
Query: 400 SRRPLAP 380
+ P P
Sbjct: 1094 EKGPQGP 1100
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGLAASVPLL-NSNKSKDRGTTPSGTSPG 401
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 995 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1054
Query: 400 SRRPLAP 380
+ P P
Sbjct: 1055 EKGPQGP 1061
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGLAASVPLL-NSNKSKDRGTTPSGTSPG 401
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 1046 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1105
Query: 400 SRRPLAP 380
+ P P
Sbjct: 1106 EKGPQGP 1112
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGLAASVPLL-NSNKSKDRGTTPSGTSPG 401
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 1034 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 1093
Query: 400 SRRPLAP 380
+ P P
Sbjct: 1094 EKGPQGP 1100
>AC009480-2|AAX93050.1| 513|Homo sapiens unknown protein.
Length = 513
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 13 PNQHPGPRPPAPAEGLLPVALV 78
P Q PGP PP+P GL P+ L+
Sbjct: 174 PTQDPGPPPPSPLLGLKPLQLL 195
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 574 LPASWFADGVEGGNSEQGRLGVSGSPNIR-AAGLAASVPLL-NSNKSKDRGTTPSGTSPG 401
LP + A G++GG QG G GSP R +AG A + L G +PG
Sbjct: 245 LPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPG 304
Query: 400 SRRPLAP 380
+ P P
Sbjct: 305 EKGPQGP 311
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 556 ADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGS 398
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 277 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGDPGA 328
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 556 ADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGS 398
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 556 ADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGS 398
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 556 ADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGS 398
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>AF062181-1|AAC18217.1| 139|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 139
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 448 YYSAMGPTLPTPPLVYWGYPT 510
YY A GPT+ T P+ YWG T
Sbjct: 112 YYCARGPTVTTFPVDYWGQGT 132
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 556 ADGVEGGNSEQGRLGVSGSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPGS 398
A G+ GG E G+ G G P R A +P + K +D G S PG+
Sbjct: 424 APGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGED-GKDGSPGEPGA 475
>BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein.
Length = 1098
Score = 30.3 bits (65), Expect = 6.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = -1
Query: 505 GSPNIRAAGLAASVPLLNSNKSKDRGTTPSGTSPG--SRRPLAPCSCRRLNTGTPRCTVV 332
GSP AG +PL ++++ RG +P SP S P C + T
Sbjct: 18 GSPRPPTAGPGCPIPL--ASRALQRGPSPGPLSPSLLSNSPSGRCHHVEASAATTALPAP 75
Query: 331 SSRRSCTGDASAGHRGKR 278
++ C G +A G R
Sbjct: 76 AAASPCLGPVAAAGSGLR 93
>AL713647-1|CAD28458.1| 1232|Homo sapiens hypothetical protein
protein.
Length = 1232
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1
Query: 568 ASWFADGVEGGNSEQGRLGVSGS 500
A W +GVE NSE+ R GVSGS
Sbjct: 877 AKWVLNGVELTNSEEYRYGVSGS 899
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,648,451
Number of Sequences: 237096
Number of extensions: 2924474
Number of successful extensions: 24257
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 22552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24182
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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