Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0784
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0040 + 11816056-11819069,11819837-11820428 33 0.19
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 33 0.19
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 32 0.45
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 30 1.4
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 30 1.8
11_06_0142 - 20564572-20565951 29 2.4
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 29 2.4
10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294... 28 5.5
07_01_0588 + 4370771-4370983,4371069-4371167,4371268-4371399,437... 28 5.5
05_07_0219 - 28474661-28475146,28475979-28476644 28 5.5
04_04_0437 + 25193263-25194627 28 5.5
04_03_0999 - 21600231-21600788,21600896-21601056,21601149-216012... 28 5.5
01_07_0257 - 42343493-42343528,42344215-42344271,42344272-423443... 28 5.5
06_01_0778 + 5816588-5816885,5817554-5817615,5818764-5818905,581... 28 7.2
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 28 7.2
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 28 7.2
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 28 7.2
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 28 7.2
01_01_1059 - 8356328-8356645,8357567-8357865,8358119-8358124,835... 28 7.2
11_04_0137 + 13909204-13909315,13910002-13910999,13911058-139112... 27 9.6
09_03_0119 - 12497422-12497889 27 9.6
07_03_0439 + 18212584-18213065,18214164-18215010 27 9.6
01_05_0204 + 19246633-19246938,19247091-19247192,19247314-192474... 27 9.6
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 481 PLPHRVPVQGD-GGQGLRHPVQPRGRAQGHVLPPHRHV--EGDPAAAHRRPLP 630
P P PV GD G +G+ V +G A+G + P R V G P AA P P
Sbjct: 49 PPPPTAPVAGDDGSKGVEGVVANQGGAEGVAVSPDRSVPLSGGPTAASSLPPP 101
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 212 STLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 352
S LLD + E D +++PD+ + VF+++ +P+++D G K
Sbjct: 103 SKLLDPKRGRTEVFDGFSSVFSPDSSQHDVFSQVMNPLVDDLLLGGK 149
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = -2
Query: 603 WVSFDMP----VRG*NVPLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRV 436
W SFD P V G ++ + + P + +Y ++ G+ GY S PQ
Sbjct: 170 WQSFDHPTDALVPGQSLLQGMILKANTSPTNWTESKIYITILQDGVYGYVESTPPQLYYN 229
Query: 435 ETTNSPAGSRLPSVSTSPQFLGGCLSVFLK 346
++ R+P+ T F GC S+F++
Sbjct: 230 YVVSTNKSKRVPTTVT---FTNGCFSIFVQ 256
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 213 DPNEVFLFFRLSNTXLVRYFFSSDLE-SDPWSLLKPASNFSRLAASTIVAAFLA 55
D +++ L + LV YF+ SD SLL SNF+RLA+ + ++ F++
Sbjct: 139 DASKLALKHTRAGAPLVAYFWDKTFAWSDASSLLPFCSNFTRLASQSTMSGFVS 192
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 201 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPC 302
P PP A+ R SRT TPA+ S+ P+ PC
Sbjct: 340 PAPPPPPPPAAKRTSRTSTPATTSS-SAPASGPC 372
>11_06_0142 - 20564572-20565951
Length = 459
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 216 PSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 317
P L S V R+W A + RR R+P P CL
Sbjct: 31 PDLVHSGAVCRSWHSAFATFRRLGLRSPPHPPCL 64
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 481 PLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQ 636
P P P G+RHPV R + HV PP P+++ R+ P Q
Sbjct: 48 PAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPP----LPPPSSSERQVAPYQ 95
>10_08_1063 -
22628642-22628716,22628806-22629012,22629325-22629433,
22629547-22629657,22630466-22630513,22630636-22630713,
22632151-22632254,22632360-22632470,22632555-22632791
Length = 359
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 454 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQP 546
P+ RG Q PH++ + D G G+++P P
Sbjct: 322 PMQRGAGAQSHPHQLRRKADQGMGMQNPGYP 352
>07_01_0588 +
4370771-4370983,4371069-4371167,4371268-4371399,
4372027-4372092,4372458-4372523,4372633-4372707,
4373423-4373653
Length = 293
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Frame = +1
Query: 511 DGGQGLRHPVQPRGR------AQGHVLPPHRHVEGDPAAAHRRPLPVQG 639
DGG+ R PVQ G A V PPH P H +P P +G
Sbjct: 67 DGGRTDRDPVQLAGLFAPVFGAAAGVQPPHLRAPPPPQVFHAQPKPGEG 115
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 201 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 317
PH PPS S+ + T T + T TP+ P S + L
Sbjct: 86 PHPPPPSPATSSSRTATATATATPTSPTPTPPPTSATLL 124
>04_04_0437 + 25193263-25194627
Length = 454
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 191 NKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELF 316
N TS GS D I+ G N+D YAP+ S+ A F
Sbjct: 365 NYFTSLGSCCWDLIKEGKLNVDRNCIPYAPNQRSHDECAAFF 406
>04_03_0999 -
21600231-21600788,21600896-21601056,21601149-21601241,
21601379-21601531,21601917-21601992,21602078-21602197,
21602348-21602597,21602917-21603008,21603408-21603581
Length = 558
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 459 ERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVF 352
+RP+ +RV T +R+P + +++ G LS F
Sbjct: 36 KRPRSSRVAQTRPQPEARIPGTQSDSEYMSGQLSAF 71
>01_07_0257 -
42343493-42343528,42344215-42344271,42344272-42344316,
42344374-42344518,42344606-42344733,42344939-42345044,
42345113-42345189,42345264-42345361,42345945-42346058,
42346154-42346294,42346418-42346502,42346721-42346849
Length = 386
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 496 VPVQGDGGQGLRHPVQPRGRAQGHVL---PPHRHVEGDPAAAHRRP 624
+P Q QGLR + G H+ PP++ +E D AAA R P
Sbjct: 279 IPSQYKATQGLRPLEKHAGHVASHLRILPPPNKVLENDNAAASRPP 324
>06_01_0778 +
5816588-5816885,5817554-5817615,5818764-5818905,
5819969-5820064,5820147-5820266,5820401-5820663,
5821507-5821617
Length = 363
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 33 GGSDGVQVPEKPQQWSTPQASRNWRLVSASSXDPTLSRC 149
GG G P Q + +A +NWR VSA +PT S C
Sbjct: 13 GGESGAPRRRPPPQLGSGRA-KNWRPVSAGHQEPT-SAC 49
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 27.9 bits (59), Expect = 7.2
Identities = 27/101 (26%), Positives = 43/101 (42%)
Frame = -2
Query: 519 SSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVFLKPL 340
+++++Y+ + G K SS R R ++ G RL ST P LG S F P
Sbjct: 509 NAVNMYYSPLGPGFKQIESSP-DVRLRPRFSHD-RGIRLSPGSTGPMSLGASPSQFTPPN 566
Query: 339 W*SSMIGSNSSANTEYDSASGA*IPTPESKFSTPDWMQSRR 217
+ + +++ + ASG +P K TP RR
Sbjct: 567 YQMQIPSNSTGMHGSGSPASGGIHGSPLGK--TPSSYSKRR 605
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 535 PVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLP 630
P+ PR P +RH +G H+ PLP
Sbjct: 339 PLHPRSGGMAPESPTNRHDDGKKKQTHKLPLP 370
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 267 PTPESKFSTPDWMQS 223
P PE+K TPDW+QS
Sbjct: 117 PPPEAKKVTPDWLQS 131
>02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = -1
Query: 466 LERAAAAHAGGDHELAGGVEVAERVHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHGVRL 287
LER A GD ++ V + ++ + R G+ V + V+ G HG +
Sbjct: 830 LERRRAELDAGDQKIRELVSILDQ-RKDESIERTFKGVARHFREVFSELVQ--GGHGHLV 886
Query: 286 GVRRVDTDAGVQVLDTRLDAVKEGGSE 206
+++ D DAG + +D D +E SE
Sbjct: 887 MMKKKDGDAGDEDIDNDEDGPREPDSE 913
>01_01_1059 -
8356328-8356645,8357567-8357865,8358119-8358124,
8358276-8358720,8359722-8360036
Length = 460
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 153 RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPS 311
RS G Y+ R H D P + + +R R S++PC PS
Sbjct: 224 RSQSKGYYNERPLDGRSHDDMPKFSKESPQARASANYGAKGRPAQSKSPCQPS 276
>11_04_0137 +
13909204-13909315,13910002-13910999,13911058-13911267,
13911522-13912056,13912154-13912461
Length = 720
Score = 27.5 bits (58), Expect = 9.6
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -2
Query: 495 SVRQGLKG-YPSSERP--QRTRV-ETTNSPAGSRLPSVSTSPQFLGGCLSVFLKPLW*SS 328
S R+G + + S +RP Q T E T AGS +P+ ST+P VF P +
Sbjct: 521 SSRRGYEAAHTSHDRPSFQLTPAPEYTRGSAGSGVPTSSTAPP----RPQVFQTPPYVQP 576
Query: 327 MIGSNSSANTEYDSASGA*IPTPESKFSTPDW 232
G++ SA+ Y +PT ++ +TP W
Sbjct: 577 TQGASGSAHFPY-------MPTGDNVLNTPAW 601
>09_03_0119 - 12497422-12497889
Length = 155
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 207 SDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPS 311
S PP+LT + R W S S P+ PCS S
Sbjct: 100 SPPPALTKGGKGIRVWGAVSTS-YGVPNAAPCSVS 133
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/43 (23%), Positives = 21/43 (48%)
Frame = -2
Query: 516 SISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVST 388
++S +WD+ +G ++ P R +TN P+ + + T
Sbjct: 29 TVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHT 71
>01_05_0204 +
19246633-19246938,19247091-19247192,19247314-19247431,
19247977-19247996,19248122-19248160,19248282-19248342,
19248464-19248664,19248756-19249057,19249448-19249601,
19249683-19249939,19250015-19250045,19251027-19251166,
19252067-19252177,19253071-19253283
Length = 684
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +2
Query: 224 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLG 403
D Q+ ++N D G + + SV+ E DP+ NG ++TD++ ++ +D
Sbjct: 342 DITQNDMQN-DCGTWDFGGCDDQESVYDEHCDPMDHSSMNGQEETDEYTFESAEGLDVNE 400
Query: 404 NLDPAGEFV 430
+D +F+
Sbjct: 401 RIDKIADFL 409
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,361
Number of Sequences: 37544
Number of extensions: 400912
Number of successful extensions: 1733
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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