Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0784
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069099-1|AAL39244.1| 562|Drosophila melanogaster GH11670p pro... 295 4e-80
AE014296-1575|AAN11982.1| 432|Drosophila melanogaster CG32031-P... 295 4e-80
AE014296-1574|AAF50325.2| 562|Drosophila melanogaster CG32031-P... 295 4e-80
AE014296-1576|AAF50326.2| 396|Drosophila melanogaster CG32031-P... 293 2e-79
AE014296-1577|AAN11983.1| 356|Drosophila melanogaster CG32031-P... 290 1e-78
U26939-1|AAA68172.1| 354|Drosophila melanogaster arginine kinas... 266 1e-71
AE014296-1573|AAF50327.1| 388|Drosophila melanogaster CG5144-PA... 225 3e-59
BT012434-1|AAS93705.1| 400|Drosophila melanogaster RH66859p pro... 223 2e-58
U26940-1|AAA68173.1| 264|Drosophila melanogaster arginine kinas... 183 2e-46
AY118820-1|AAM50680.1| 457|Drosophila melanogaster GH24918p pro... 132 3e-31
AE014297-2097|AAF55238.2| 457|Drosophila melanogaster CG4546-PA... 132 3e-31
BT030260-1|ABN49399.1| 128|Drosophila melanogaster IP18368p pro... 81 9e-16
AY075230-1|AAL68097.1| 214|Drosophila melanogaster AT19006p pro... 64 2e-10
AE013599-3477|AAM71129.1| 468|Drosophila melanogaster CG30274-P... 35 0.082
BT001711-1|AAN71466.1| 182|Drosophila melanogaster RE67695p pro... 33 0.43
AE014296-1719|AAN11954.1| 182|Drosophila melanogaster CG16707-P... 33 0.43
AE014296-1718|AAN11953.1| 182|Drosophila melanogaster CG16707-P... 33 0.43
AE014296-1717|AAN11952.1| 183|Drosophila melanogaster CG16707-P... 33 0.43
AE014296-1716|AAF50218.1| 183|Drosophila melanogaster CG16707-P... 33 0.43
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 32 0.57
AE014298-1823|AAF48211.2| 308|Drosophila melanogaster CG4404-PA... 30 2.3
BT001593-1|AAN71348.1| 750|Drosophila melanogaster RE27538p pro... 30 3.1
AE014296-790|AAF47859.2| 750|Drosophila melanogaster CG15005-PA... 30 3.1
X98882-1|CAA67385.1| 391|Drosophila melanogaster nuclear hormon... 29 5.4
X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormon... 29 5.4
U01088-1|AAA19976.2| 390|Drosophila melanogaster truncated nucl... 29 5.4
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 29 5.4
AF238309-1|AAF69495.1| 385|Drosophila melanogaster nuclear rece... 29 5.4
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 29 5.4
AE014296-3499|AAN12161.3| 392|Drosophila melanogaster CG18023-P... 29 5.4
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 29 5.4
AE014297-4538|AAN14215.1| 154|Drosophila melanogaster CG31031-P... 29 7.1
X79493-1|CAA56038.1| 838|Drosophila melanogaster transcription ... 28 9.4
BT024931-1|ABE01161.1| 503|Drosophila melanogaster IP16420p pro... 28 9.4
BT011390-1|AAR96182.1| 624|Drosophila melanogaster GH01157p pro... 28 9.4
AY075546-1|AAL68353.1| 308|Drosophila melanogaster RH45455p pro... 28 9.4
AY052096-1|AAK93520.1| 574|Drosophila melanogaster SD04526p pro... 28 9.4
AY051857-1|AAK93281.1| 734|Drosophila melanogaster LD35420p pro... 28 9.4
AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein. 28 9.4
AF146797-1|AAD38010.1| 259|Drosophila melanogaster nucleotide e... 28 9.4
AE014296-3703|AAN12199.1| 574|Drosophila melanogaster CG32452-P... 28 9.4
AE014296-3702|AAN12198.1| 574|Drosophila melanogaster CG32452-P... 28 9.4
AE014135-133|AAN06513.1| 624|Drosophila melanogaster CG1464-PB,... 28 9.4
AE014135-132|AAX52513.1| 857|Drosophila melanogaster CG1464-PC,... 28 9.4
AE014135-131|AAF59318.1| 838|Drosophila melanogaster CG1464-PA,... 28 9.4
AE014135-130|AAX52512.1| 898|Drosophila melanogaster CG1464-PD,... 28 9.4
AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA... 28 9.4
AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC... 28 9.4
AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB... 28 9.4
AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA... 28 9.4
AE013599-1966|AAF58196.1| 259|Drosophila melanogaster CG10215-P... 28 9.4
>AY069099-1|AAL39244.1| 562|Drosophila melanogaster GH11670p
protein.
Length = 562
Score = 295 bits (723), Expect = 4e-80
Identities = 140/196 (71%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
Frame = +2
Query: 59 RKAATMVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQ 235
RK TMVDAA L KLE G+ T+ VFD+LKNK T +F STLLD IQ
Sbjct: 202 RKQDTMVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKVTPTFKSTLLDVIQ 261
Query: 236 SGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDP 415
SG+EN DSGVGIYAPDAE+Y+VFA+LFDPIIEDYH GFKKTDKHP N+GDV T GN+DP
Sbjct: 262 SGLENHDSGVGIYAPDAEAYTVFADLFDPIIEDYHGGFKKTDKHPASNFGDVSTFGNVDP 321
Query: 416 AGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSK 595
E+V+STRVRCGRS++GYPFNPCLTE+QYKEME KVS TLS LEGELKG FYPLTGM K
Sbjct: 322 TNEYVISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLEGELKGKFYPLTGMEK 381
Query: 596 ETQQQLIDDHFLFKEG 643
QQQLIDDHFLFKEG
Sbjct: 382 AVQQQLIDDHFLFKEG 397
>AE014296-1575|AAN11982.1| 432|Drosophila melanogaster CG32031-PB,
isoform B protein.
Length = 432
Score = 295 bits (723), Expect = 4e-80
Identities = 140/196 (71%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
Frame = +2
Query: 59 RKAATMVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQ 235
RK TMVDAA L KLE G+ T+ VFD+LKNK T +F STLLD IQ
Sbjct: 72 RKQDTMVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKVTPTFKSTLLDVIQ 131
Query: 236 SGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDP 415
SG+EN DSGVGIYAPDAE+Y+VFA+LFDPIIEDYH GFKKTDKHP N+GDV T GN+DP
Sbjct: 132 SGLENHDSGVGIYAPDAEAYTVFADLFDPIIEDYHGGFKKTDKHPASNFGDVSTFGNVDP 191
Query: 416 AGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSK 595
E+V+STRVRCGRS++GYPFNPCLTE+QYKEME KVS TLS LEGELKG FYPLTGM K
Sbjct: 192 TNEYVISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLEGELKGKFYPLTGMEK 251
Query: 596 ETQQQLIDDHFLFKEG 643
QQQLIDDHFLFKEG
Sbjct: 252 AVQQQLIDDHFLFKEG 267
>AE014296-1574|AAF50325.2| 562|Drosophila melanogaster CG32031-PA,
isoform A protein.
Length = 562
Score = 295 bits (723), Expect = 4e-80
Identities = 140/196 (71%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
Frame = +2
Query: 59 RKAATMVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQ 235
RK TMVDAA L KLE G+ T+ VFD+LKNK T +F STLLD IQ
Sbjct: 202 RKQDTMVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKVTPTFKSTLLDVIQ 261
Query: 236 SGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDP 415
SG+EN DSGVGIYAPDAE+Y+VFA+LFDPIIEDYH GFKKTDKHP N+GDV T GN+DP
Sbjct: 262 SGLENHDSGVGIYAPDAEAYTVFADLFDPIIEDYHGGFKKTDKHPASNFGDVSTFGNVDP 321
Query: 416 AGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSK 595
E+V+STRVRCGRS++GYPFNPCLTE+QYKEME KVS TLS LEGELKG FYPLTGM K
Sbjct: 322 TNEYVISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLEGELKGKFYPLTGMEK 381
Query: 596 ETQQQLIDDHFLFKEG 643
QQQLIDDHFLFKEG
Sbjct: 382 AVQQQLIDDHFLFKEG 397
>AE014296-1576|AAF50326.2| 396|Drosophila melanogaster CG32031-PC,
isoform C protein.
Length = 396
Score = 293 bits (718), Expect = 2e-79
Identities = 139/195 (71%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
Frame = +2
Query: 62 KAATMVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQS 238
K TMVDAA L KLE G+ T+ VFD+LKNK T +F STLLD IQS
Sbjct: 37 KQDTMVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKVTPTFKSTLLDVIQS 96
Query: 239 GVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPA 418
G+EN DSGVGIYAPDAE+Y+VFA+LFDPIIEDYH GFKKTDKHP N+GDV T GN+DP
Sbjct: 97 GLENHDSGVGIYAPDAEAYTVFADLFDPIIEDYHGGFKKTDKHPASNFGDVSTFGNVDPT 156
Query: 419 GEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKE 598
E+V+STRVRCGRS++GYPFNPCLTE+QYKEME KVS TLS LEGELKG FYPLTGM K
Sbjct: 157 NEYVISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLEGELKGKFYPLTGMEKA 216
Query: 599 TQQQLIDDHFLFKEG 643
QQQLIDDHFLFKEG
Sbjct: 217 VQQQLIDDHFLFKEG 231
>AE014296-1577|AAN11983.1| 356|Drosophila melanogaster CG32031-PD,
isoform D protein.
Length = 356
Score = 290 bits (711), Expect = 1e-78
Identities = 137/191 (71%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Frame = +2
Query: 74 MVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQSGVEN 250
MVDAA L KLE G+ T+ VFD+LKNK T +F STLLD IQSG+EN
Sbjct: 1 MVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKVTPTFKSTLLDVIQSGLEN 60
Query: 251 LDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFV 430
DSGVGIYAPDAE+Y+VFA+LFDPIIEDYH GFKKTDKHP N+GDV T GN+DP E+V
Sbjct: 61 HDSGVGIYAPDAEAYTVFADLFDPIIEDYHGGFKKTDKHPASNFGDVSTFGNVDPTNEYV 120
Query: 431 VSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQ 610
+STRVRCGRS++GYPFNPCLTE+QYKEME KVS TLS LEGELKG FYPLTGM K QQQ
Sbjct: 121 ISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLEGELKGKFYPLTGMEKAVQQQ 180
Query: 611 LIDDHFLFKEG 643
LIDDHFLFKEG
Sbjct: 181 LIDDHFLFKEG 191
>U26939-1|AAA68172.1| 354|Drosophila melanogaster arginine kinase
protein.
Length = 354
Score = 266 bits (653), Expect = 1e-71
Identities = 127/191 (66%), Positives = 141/191 (73%), Gaps = 1/191 (0%)
Frame = +2
Query: 74 MVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNK-KTSFGSTLLDCIQSGVEN 250
MVDAA L KLE G+ T+ VFD+LKNK D IQSG+EN
Sbjct: 1 MVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKGHAHLQVDPADVIQSGLEN 60
Query: 251 LDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFV 430
DS IYAPDAE+Y+VFA+LFDP IEDYH GFKKTDKHP N+GDV T GN+DP E+V
Sbjct: 61 HDSASAIYAPDAEAYTVFADLFDPFIEDYHGGFKKTDKHPASNFGDVSTFGNVDPTNEYV 120
Query: 431 VSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQ 610
+STRVRCGRS++GYPFNPCLTE+QYKEME KVS TLS LEGELKG FYPLTGM K QQQ
Sbjct: 121 ISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLEGELKGKFYPLTGMEKAVQQQ 180
Query: 611 LIDDHFLFKEG 643
LIDDHFLFKEG
Sbjct: 181 LIDDHFLFKEG 191
>AE014296-1573|AAF50327.1| 388|Drosophila melanogaster CG5144-PA
protein.
Length = 388
Score = 225 bits (551), Expect = 3e-59
Identities = 105/190 (55%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Frame = +2
Query: 77 VDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQSGVENL 253
VD +E++E G+ T+ +F+ LK K T SF STLL CI SG+ N
Sbjct: 31 VDKEVMEQMEKGYKKLAESKSKSLLKKHLTKEIFEKLKTKTTPSFNSTLLHCISSGMCNH 90
Query: 254 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVV 433
DSGVG+YAPD E+Y VFA+LFDP+IE+YH FKKTDK P +G NLDP G F+V
Sbjct: 91 DSGVGLYAPDPEAYKVFADLFDPVIEEYHKCFKKTDKQPATAFGKGADFENLDPDGHFIV 150
Query: 434 STRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQL 613
STRVRCGR+++GYPFNPCLTE+ Y E+E K+ G ++SL GE KG + PLTGM K Q+QL
Sbjct: 151 STRVRCGRAVKGYPFNPCLTEADYMELESKICGAVTSLTGEYKGKYMPLTGMDKCIQEQL 210
Query: 614 IDDHFLFKEG 643
I+DH+LFKEG
Sbjct: 211 IEDHYLFKEG 220
>BT012434-1|AAS93705.1| 400|Drosophila melanogaster RH66859p
protein.
Length = 400
Score = 223 bits (545), Expect = 2e-58
Identities = 104/189 (55%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
Frame = +2
Query: 77 VDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQSGVENL 253
VD +E++E G+ T+ +F+ LK K T SF STLL CI SG+ N
Sbjct: 49 VDKEVMEQMEKGYKKLAESKSKSLLKKHLTKEIFEKLKTKTTPSFNSTLLHCISSGMCNH 108
Query: 254 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVV 433
DSGVG+YAPD E+Y VFA+LFDP+IE+YH FKKTDK P +G NLDP G F+V
Sbjct: 109 DSGVGLYAPDPEAYKVFADLFDPVIEEYHKCFKKTDKQPATAFGKGADFENLDPDGHFIV 168
Query: 434 STRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQL 613
STRVRCGR+++GYPFNPCLTE+ Y E+E K+ G ++SL GE KG + PLTGM K Q+QL
Sbjct: 169 STRVRCGRAVKGYPFNPCLTEADYMELESKICGAVTSLTGEYKGKYMPLTGMDKCIQEQL 228
Query: 614 IDDHFLFKE 640
I+DH+LFKE
Sbjct: 229 IEDHYLFKE 237
>U26940-1|AAA68173.1| 264|Drosophila melanogaster arginine kinase
protein.
Length = 264
Score = 183 bits (446), Expect = 2e-46
Identities = 80/100 (80%), Positives = 87/100 (87%)
Frame = +2
Query: 344 GFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDK 523
GFKKTDKHP N+GDV T GN+DP E+V+STRVRCGRS++GYPFNPCLTE+QYKEME K
Sbjct: 2 GFKKTDKHPASNFGDVSTFGNVDPTNEYVISTRVRCGRSMQGYPFNPCLTEAQYKEMESK 61
Query: 524 VSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEG 643
VS TLS LEGELKG FYPLTGM K QQQLIDDHFLFKEG
Sbjct: 62 VSSTLSGLEGELKGKFYPLTGMEKAVQQQLIDDHFLFKEG 101
>AY118820-1|AAM50680.1| 457|Drosophila melanogaster GH24918p
protein.
Length = 457
Score = 132 bits (320), Expect = 3e-31
Identities = 62/144 (43%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Frame = +2
Query: 218 LLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKN--WGDV 391
L DC SG E+ D+ VGI+A DA+SY VF +LFDPII+DYH + K+ +G+V
Sbjct: 141 LYDCAVSGFEHHDAPVGIFAADADSYDVFNKLFDPIIKDYHGQMDNENDVLQKDPDFGNV 200
Query: 392 DTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTF 571
D + NLDP ++++S R+R R++EG PF P LTE Q+ E+E+KV +++GEL G++
Sbjct: 201 DEIENLDPERKYILSARIRLARNIEGLPFFPKLTEKQFIEVEEKVRSATETMDGELIGSY 260
Query: 572 YPLTGMSKETQQQLIDDHFLFKEG 643
+ + ETQ +++ H LF+ G
Sbjct: 261 LTMADIDAETQAEMVKRHILFQRG 284
>AE014297-2097|AAF55238.2| 457|Drosophila melanogaster CG4546-PA
protein.
Length = 457
Score = 132 bits (320), Expect = 3e-31
Identities = 62/144 (43%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Frame = +2
Query: 218 LLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKN--WGDV 391
L DC SG E+ D+ VGI+A DA+SY VF +LFDPII+DYH + K+ +G+V
Sbjct: 141 LYDCAVSGFEHHDAPVGIFAADADSYDVFNKLFDPIIKDYHGQMDNENDVLQKDPDFGNV 200
Query: 392 DTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTF 571
D + NLDP ++++S R+R R++EG PF P LTE Q+ E+E+KV +++GEL G++
Sbjct: 201 DEIENLDPERKYILSARIRLARNIEGLPFFPKLTEKQFIEVEEKVRSATETMDGELIGSY 260
Query: 572 YPLTGMSKETQQQLIDDHFLFKEG 643
+ + ETQ +++ H LF+ G
Sbjct: 261 LTMADIDAETQAEMVKRHILFQRG 284
>BT030260-1|ABN49399.1| 128|Drosophila melanogaster IP18368p
protein.
Length = 128
Score = 81.4 bits (192), Expect = 9e-16
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 62 KAATMVDAASLEKLEAGFXXXXXXXXXXXXXXXXTRXVFDSLKNKKT-SFGSTLLDCIQS 238
K TMVDAA L KLE G+ T+ VFD+LKNK T +F STLLD IQS
Sbjct: 5 KQDTMVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKVTPTFKSTLLDVIQS 64
Query: 239 GVENLDSGVGIYAPDAESYSVFAEL 313
G+EN DSGVGIYAPDAE ++ ++L
Sbjct: 65 GLENHDSGVGIYAPDAEVEALTSKL 89
>AY075230-1|AAL68097.1| 214|Drosophila melanogaster AT19006p
protein.
Length = 214
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 509 EMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEG 643
E+E K+ G ++SL GE KG + PLTGM K Q+QLI+DH+LFKEG
Sbjct: 2 ELESKICGAVTSLTGEYKGKYMPLTGMDKCIQEQLIEDHYLFKEG 46
>AE013599-3477|AAM71129.1| 468|Drosophila melanogaster CG30274-PA
protein.
Length = 468
Score = 35.1 bits (77), Expect = 0.082
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +2
Query: 167 RXVFDSLKNKKTSFGSTLLDCI------QSGVENLDSGV--GIYAPDAESYSVFAELFDP 322
R V+D +K ++T L D + S +L+ + GI APD + + VF E P
Sbjct: 88 RGVYDKIKRRQTRLDHNLFDVLWPAMRKTSKARHLEEDINCGIIAPDFDVFVVFQEFLVP 147
Query: 323 IIEDYH 340
+++D H
Sbjct: 148 LLKDMH 153
>BT001711-1|AAN71466.1| 182|Drosophila melanogaster RE67695p
protein.
Length = 182
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 159 TLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCS 305
T P +T+ T++ + PP T++ + + + TPAS ++ TP+ T S
Sbjct: 52 TPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTPASTTSS 100
>AE014296-1719|AAN11954.1| 182|Drosophila melanogaster CG16707-PB,
isoform B protein.
Length = 182
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 159 TLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCS 305
T P +T+ T++ + PP T++ + + + TPAS ++ TP+ T S
Sbjct: 52 TPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTPASTTSS 100
>AE014296-1718|AAN11953.1| 182|Drosophila melanogaster CG16707-PA,
isoform A protein.
Length = 182
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 159 TLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCS 305
T P +T+ T++ + PP T++ + + + TPAS ++ TP+ T S
Sbjct: 52 TPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTPASTTSS 100
>AE014296-1717|AAN11952.1| 183|Drosophila melanogaster CG16707-PD,
isoform D protein.
Length = 183
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 159 TLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCS 305
T P +T+ T++ + PP T++ + + + TPAS ++ TP+ T S
Sbjct: 53 TPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTPASTTSS 101
>AE014296-1716|AAF50218.1| 183|Drosophila melanogaster CG16707-PC,
isoform C protein.
Length = 183
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 159 TLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCS 305
T P +T+ T++ + PP T++ + + + TPAS ++ TP+ T S
Sbjct: 53 TPPSTSTTSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTPASTTSS 101
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +3
Query: 66 PQQWSTPQASRNWRLVSASSXDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 245
P+ +T SR S+ P SR +T + +T T RP + P T +
Sbjct: 1104 PRSTTTTTTSRPTTTTPRSTTTPCTSR--PTTTTPRSTTTTTTSRPTTTTPRSTTTP--C 1159
Query: 246 RTWTPASVSTRRTPSRTPC 302
T TP++ TR T +R PC
Sbjct: 1160 PTTTPSASPTRTTTTRRPC 1178
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +3
Query: 66 PQQWSTPQASRNWRLVSASSXDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 245
P+ +TP SR S+ S C +T + +T T RP + P T + S
Sbjct: 336 PRCTTTPSTSRPTTTTPRSTTKT--STCAPTTTTPRPTTTPSTSRPTTTTPRSTTTTSTS 393
Query: 246 RTWTPASVSTRRTPSRTP 299
R T ST T +R P
Sbjct: 394 RPTTTTPRSTTTTTTRRP 411
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 135 TLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRV---SRTWTPASVSTRRTPSRTPCS 305
T S C +T + +T T RP + P T + +RT TP S +T T T +
Sbjct: 277 TTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRT-TPRSTTTTSTSRPTTTT 335
Query: 306 PSC 314
P C
Sbjct: 336 PRC 338
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 141 SRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSR--TWTPASVSTRRTPSRTPCSP 308
S C +T + +T T RP + P T + SR T TP S +T T T +P
Sbjct: 999 STCAPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTP 1056
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +3
Query: 66 PQQWSTPQASRNWRLVSASSXDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 245
P+ +T SR S+ S C +T + +T T RP + P T + S
Sbjct: 1056 PRSTTTTSTSRPTTTTPRSTTKT--STCAPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTS 1113
Query: 246 R--TWTPASVSTRRTPSRTPCSP 308
R T TP S +T T T +P
Sbjct: 1114 RPTTTTPRSTTTPCTSRPTTTTP 1136
>AE014298-1823|AAF48211.2| 308|Drosophila melanogaster CG4404-PA
protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -2
Query: 555 SPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSPQF 376
S L VP L W + Q KG+ S T T SP P+ S F
Sbjct: 196 SQQSLVSVPAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTSPPPPPQPATSALSVF 255
Query: 375 LGG 367
GG
Sbjct: 256 TGG 258
>BT001593-1|AAN71348.1| 750|Drosophila melanogaster RE27538p
protein.
Length = 750
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 278 PDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKN 379
P +SYS++ + + YH F + KHPPK+
Sbjct: 217 PAPDSYSIYEQKIPNV--GYHQNFAEPPKHPPKH 248
>AE014296-790|AAF47859.2| 750|Drosophila melanogaster CG15005-PA
protein.
Length = 750
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 278 PDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKN 379
P +SYS++ + + YH F + KHPPK+
Sbjct: 217 PAPDSYSIYEQKIPNV--GYHQNFAEPPKHPPKH 248
>X98882-1|CAA67385.1| 391|Drosophila melanogaster nuclear hormone
receptor protein.
Length = 391
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 42 RVKTPSTPQTPQMCSIASSPSELGGCNS 69
>X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormone
receptor protein.
Length = 865
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 516 RVKTPSTPQTPQMCSIASSPSELGGCNS 543
>U01088-1|AAA19976.2| 390|Drosophila melanogaster truncated nuclear
hormone receptorsuperfamily protein protein.
Length = 390
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 43 RVKTPSTPQTPQMCSIASSPSELGGCNS 70
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 517 RVKTPSTPQTPQMCSIASSPSELGGCNS 544
>AF238309-1|AAF69495.1| 385|Drosophila melanogaster nuclear
receptor E78B protein.
Length = 385
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 36 RVKTPSTPQTPQMCSIASSPSELGGCNS 63
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 517 RVKTPSTPQTPQMCSIASSPSELGGCNS 544
>AE014296-3499|AAN12161.3| 392|Drosophila melanogaster CG18023-PB,
isoform B protein.
Length = 392
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 43 RVKTPSTPQTPQMCSIASSPSELGGCNS 70
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 441 RVETTNSPAGSRLPSVSTSPQFLGGCLS 358
RV+T ++P ++ S+++SP LGGC S
Sbjct: 513 RVKTPSTPQTPQMCSIASSPSELGGCNS 540
>AE014297-4538|AAN14215.1| 154|Drosophila melanogaster CG31031-PA
protein.
Length = 154
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 513 ISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSPQFLGG 367
IS Y + V G Y +PQR R + N PA +P + F G
Sbjct: 16 ISFYGEDVIPGSSFYECDSKPQRQRQLSRNGPAFGPMPINEPTVNFGNG 64
>X79493-1|CAA56038.1| 838|Drosophila melanogaster transcription
factor protein.
Length = 838
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 508 GDGGQGLRHPVQPRGRAQGHVLPP 579
G GG H +Q G AQGH L P
Sbjct: 584 GVGGHQNTHHIQSNGHAQGHALVP 607
>BT024931-1|ABE01161.1| 503|Drosophila melanogaster IP16420p
protein.
Length = 503
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 121 LAETSLQFLEACGVDHCCGFSGT*TPSEPP-SCRFLQPG 8
LA ++LQFL C + GFS +P +PP C L G
Sbjct: 19 LALSTLQFLSVCKSANLPGFSPALSPPKPPKQCVTLSAG 57
>BT011390-1|AAR96182.1| 624|Drosophila melanogaster GH01157p
protein.
Length = 624
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 508 GDGGQGLRHPVQPRGRAQGHVLPP 579
G GG H +Q G AQGH L P
Sbjct: 370 GVGGHQNTHHIQSNGHAQGHALVP 393
>AY075546-1|AAL68353.1| 308|Drosophila melanogaster RH45455p
protein.
Length = 308
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = -2
Query: 555 SPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSPQF 376
S L VP L W + Q KG+ S T T P P+ S F
Sbjct: 196 SQQSLVSVPAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTPPPPPPQPATSALSVF 255
Query: 375 LGG 367
GG
Sbjct: 256 TGG 258
>AY052096-1|AAK93520.1| 574|Drosophila melanogaster SD04526p
protein.
Length = 574
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 189 RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 308
R+ R S+ S T VSR+ P RR+ SR+P P
Sbjct: 195 RSTRSTSNEKSATQRRSVSRSHIPRCRGRRRSQSRSPTEP 234
>AY051857-1|AAK93281.1| 734|Drosophila melanogaster LD35420p
protein.
Length = 734
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 121 LAETSLQFLEACGVDHCCGFSGT*TPSEPP-SCRFLQPG 8
LA ++LQFL C + GFS +P +PP C L G
Sbjct: 250 LALSTLQFLSVCKSANLPGFSPALSPPKPPKQCVTLSAG 288
>AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.
Length = 1361
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 TKRPHSDPPSLTASN-RVSRTWTPASVSTRRTPSRTP 299
T P S PP+ + S R + + T + +TRR+P+R P
Sbjct: 221 TMLPSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAP 257
>AF146797-1|AAD38010.1| 259|Drosophila melanogaster nucleotide
excision repair proteinERCC1 protein.
Length = 259
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 195 KRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 317
K+P D P+ TA N T S S R P + +P C+
Sbjct: 23 KQPKVDAPAATAVNPAPSNSTEPSGSGRPAPGKPASNPHCV 63
>AE014296-3703|AAN12199.1| 574|Drosophila melanogaster CG32452-PB,
isoform B protein.
Length = 574
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 189 RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 308
R+ R S+ S T VSR+ P RR+ SR+P P
Sbjct: 195 RSTRSTSNEKSATQRRSVSRSHIPRCRGRRRSQSRSPTEP 234
>AE014296-3702|AAN12198.1| 574|Drosophila melanogaster CG32452-PA,
isoform A protein.
Length = 574
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 189 RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 308
R+ R S+ S T VSR+ P RR+ SR+P P
Sbjct: 195 RSTRSTSNEKSATQRRSVSRSHIPRCRGRRRSQSRSPTEP 234
>AE014135-133|AAN06513.1| 624|Drosophila melanogaster CG1464-PB,
isoform B protein.
Length = 624
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 508 GDGGQGLRHPVQPRGRAQGHVLPP 579
G GG H +Q G AQGH L P
Sbjct: 370 GVGGHQNTHHIQSNGHAQGHALVP 393
>AE014135-132|AAX52513.1| 857|Drosophila melanogaster CG1464-PC,
isoform C protein.
Length = 857
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 508 GDGGQGLRHPVQPRGRAQGHVLPP 579
G GG H +Q G AQGH L P
Sbjct: 603 GVGGHQNTHHIQSNGHAQGHALVP 626
>AE014135-131|AAF59318.1| 838|Drosophila melanogaster CG1464-PA,
isoform A protein.
Length = 838
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 508 GDGGQGLRHPVQPRGRAQGHVLPP 579
G GG H +Q G AQGH L P
Sbjct: 584 GVGGHQNTHHIQSNGHAQGHALVP 607
>AE014135-130|AAX52512.1| 898|Drosophila melanogaster CG1464-PD,
isoform D protein.
Length = 898
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 508 GDGGQGLRHPVQPRGRAQGHVLPP 579
G GG H +Q G AQGH L P
Sbjct: 644 GVGGHQNTHHIQSNGHAQGHALVP 667
>AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA,
isoform A protein.
Length = 1542
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 121 LAETSLQFLEACGVDHCCGFSGT*TPSEPP-SCRFLQPG 8
LA ++LQFL C + GFS +P +PP C L G
Sbjct: 1058 LALSTLQFLSVCKSANLPGFSPALSPPKPPKQCVTLSAG 1096
>AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC,
isoform C protein.
Length = 1546
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 121 LAETSLQFLEACGVDHCCGFSGT*TPSEPP-SCRFLQPG 8
LA ++LQFL C + GFS +P +PP C L G
Sbjct: 1062 LALSTLQFLSVCKSANLPGFSPALSPPKPPKQCVTLSAG 1100
>AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB,
isoform B protein.
Length = 1629
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 121 LAETSLQFLEACGVDHCCGFSGT*TPSEPP-SCRFLQPG 8
LA ++LQFL C + GFS +P +PP C L G
Sbjct: 1145 LALSTLQFLSVCKSANLPGFSPALSPPKPPKQCVTLSAG 1183
>AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA
protein.
Length = 1361
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 192 TKRPHSDPPSLTASN-RVSRTWTPASVSTRRTPSRTP 299
T P S PP+ + S R + + T + +TRR+P+R P
Sbjct: 221 TMLPSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAP 257
>AE013599-1966|AAF58196.1| 259|Drosophila melanogaster CG10215-PA
protein.
Length = 259
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 195 KRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 317
K+P D P+ TA N T S S R P + +P C+
Sbjct: 23 KQPKVDAPAATAVNPAPSNSTEPSGSGRPAPGKPASNPHCV 63
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,997,814
Number of Sequences: 53049
Number of extensions: 609983
Number of successful extensions: 2673
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2657
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -