Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0780
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020543-1|AAH20543.1|  478|Homo sapiens carbohydrate kinase-lik...    52   2e-06
AF168787-1|AAF43103.1|  478|Homo sapiens CARKL protein.                52   2e-06
AF163573-1|AAF24936.1|  478|Homo sapiens CARKL protein.                52   2e-06

>BC020543-1|AAH20543.1|  478|Homo sapiens carbohydrate kinase-like
           protein.
          Length = 478

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
 Frame = +1

Query: 421 LGMDIGTTSVKVCIY-----DYHTKEVIANQNKDTAANIPSDQGI---EGNKQDVPKIVS 576
           LG+D+GTTSVK  +      D     V+A+  +   A    +  +   +G +QDV +I+ 
Sbjct: 8   LGIDLGTTSVKAALLRAAPDDPSGFAVLASCARAARAEAAVESAVAGPQGREQDVSRILQ 67

Query: 577 AVHFCVSRLPRDLLKHVTKIGICGQM 654
           A+H C++ LPR  L+ V  IG+ GQM
Sbjct: 68  ALHECLAALPRPQLRSVVGIGVSGQM 93


>AF168787-1|AAF43103.1|  478|Homo sapiens CARKL protein.
          Length = 478

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
 Frame = +1

Query: 421 LGMDIGTTSVKVCIY-----DYHTKEVIANQNKDTAANIPSDQGI---EGNKQDVPKIVS 576
           LG+D+GTTSVK  +      D     V+A+  +   A    +  +   +G +QDV +I+ 
Sbjct: 8   LGIDLGTTSVKAALLRAAPDDPSGFAVLASCARAARAEAAVESAVAGPQGREQDVSRILQ 67

Query: 577 AVHFCVSRLPRDLLKHVTKIGICGQM 654
           A+H C++ LPR  L+ V  IG+ GQM
Sbjct: 68  ALHECLAALPRPQLRSVVGIGVSGQM 93


>AF163573-1|AAF24936.1|  478|Homo sapiens CARKL protein.
          Length = 478

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
 Frame = +1

Query: 421 LGMDIGTTSVKVCIY-----DYHTKEVIANQNKDTAANIPSDQGI---EGNKQDVPKIVS 576
           LG+D+GTTSVK  +      D     V+A+  +   A    +  +   +G +QDV +I+ 
Sbjct: 8   LGIDLGTTSVKAALLRAAPDDPSGFAVLASCARAARAEAAVESAVAGPQGREQDVSRILQ 67

Query: 577 AVHFCVSRLPRDLLKHVTKIGICGQM 654
           A+H C++ LPR  L+ V  IG+ GQM
Sbjct: 68  ALHECLAALPRPQLRSVVGIGVSGQM 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,786,067
Number of Sequences: 237096
Number of extensions: 2088354
Number of successful extensions: 3375
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3372
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)