Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0731
(665 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 27 0.12
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 27 0.12
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 27 0.12
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 2.0
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 23 2.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.6
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 3.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.5
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 4.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.0
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 27.5 bits (58), Expect = 0.12
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -3
Query: 504 NLVETQ*SSK*IVEQELLFFNLL--SAI*CW 418
N+++TQ S+K + + +LFF L+ SA+ CW
Sbjct: 300 NILDTQSSAKVVSKSGVLFFGLVGDSALGCW 330
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 27.5 bits (58), Expect = 0.12
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -3
Query: 504 NLVETQ*SSK*IVEQELLFFNLL--SAI*CW 418
N+++TQ S+K + + +LFF L+ SA+ CW
Sbjct: 300 NILDTQSSAKVVSKSGVLFFGLVGDSALGCW 330
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 27.5 bits (58), Expect = 0.12
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -3
Query: 504 NLVETQ*SSK*IVEQELLFFNLL--SAI*CW 418
N+++TQ S+K + + +LFF L+ SA+ CW
Sbjct: 300 NILDTQSSAKVVSKSGVLFFGLVGDSALGCW 330
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 45 IKNDKVLWAFYVLFLCRLIISVYL 116
+KND +LW F+V +++ Y+
Sbjct: 82 MKNDVILWDFFVKNARMILLEEYI 105
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 45 IKNDKVLWAFYVLFLCRLIISVYL 116
+KND +LW F+V +++ Y+
Sbjct: 56 MKNDVILWDFFVKNARMILLEEYI 79
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -1
Query: 569 LRHSILYVIVNSKCYTPHSVFQIW 498
L+ +++ + V C+TP+ V +W
Sbjct: 259 LKMTVIIIAVFFICWTPYYVMSLW 282
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = -2
Query: 220 WTPIAAATILITHDFTTYDDYKE 152
W P +L ++ +TYDD +
Sbjct: 273 WAPFHVQRLLYVYEDSTYDDINQ 295
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 3.5
Identities = 5/22 (22%), Positives = 13/22 (59%)
Frame = -1
Query: 542 VNSKCYTPHSVFQIWLRHSNHL 477
+ + +TP+ + + W+ H +L
Sbjct: 789 IQKQSHTPNGIVKTWIAHDRYL 810
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 54 DKVLWAFYVLFLCRLIISVYLVVTQ 128
D +L +L LC + I YL VTQ
Sbjct: 118 DILLCTASILSLCAISIDRYLAVTQ 142
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 351 WLAPFSWNVLKLQ*RMV*LGSG 416
WL +SW + K M+ +G G
Sbjct: 322 WLEQYSWALFKAMSHMLCIGYG 343
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 351 WLAPFSWNVLKLQ*RMV*LGSG 416
WL +SW + K M+ +G G
Sbjct: 290 WLEQYSWALFKAMSHMLCIGYG 311
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,284
Number of Sequences: 438
Number of extensions: 3839
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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