Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0713
         (593 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ287932-1|ABB89208.1|  675|Homo sapiens DPY-19-like protein 1 p...    32   1.8  
AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens ...    32   1.8  
AB020684-1|BAA74900.1|  580|Homo sapiens KIAA0877 protein protein.     32   1.8  
AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens ...    31   2.3  
BC005152-1|AAH05152.1|  193|Homo sapiens chromosome 16 open read...    30   7.1  
AF093680-1|AAD40382.1|  193|Homo sapiens transcription factor II...    30   7.1  
AF087845-1|AAP97158.1|  193|Homo sapiens EVORF protein.                30   7.1  

>DQ287932-1|ABB89208.1|  675|Homo sapiens DPY-19-like protein 1
           protein.
          Length = 675

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 70  CLDDLFFIM-WAYPTFHAHTHLLSQYKTYIIYLFNIIINTHRVYIHTYNISINILLL 237
           C+ ++FF++ W +  F   T + S +  Y++   +I      +YIH  ++++  +L+
Sbjct: 245 CISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVLM 301


>AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45698 fis, clone FEBRA2017811. ).
          Length = 415

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +1

Query: 46  TSFKSYVHCLDDLFFIMWAYPTFHAHTHLLSQYKTYIIYLFNIIINTHRVYIHTYNISIN 225
           T  ++Y H    +  + W +   H HTH+     T+        I  HR + +TY  S  
Sbjct: 329 THIRTYTHI--QMHTLTWTH--IHTHTHIHIYVYTHTHMHTPTHIYAHR-HTYTYAHSHT 383

Query: 226 ILLLHYI*NRHTHTTIYR 279
            + +H   + H HT IYR
Sbjct: 384 YIHMHTHIHTHIHTYIYR 401



 Score = 30.3 bits (65), Expect = 5.4
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 115 HAHTHLLSQYKTYIIYLFNIIINTHRVYIHTYNISINILLLHYI*NRHTHTTIY 276
           HAHTH       +I    +    TH +Y  TY +      +H   + HTHT I+
Sbjct: 110 HAHTHAHIHIHVHIHMNIHTHTCTH-IYTCTYTVVCTHTHMHIYTHMHTHTCIH 162



 Score = 29.9 bits (64), Expect = 7.1
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = +1

Query: 115 HAHTHLLSQYKTYIIYLFNIIINTHRVYIHTYNISINILLLHYI*NRHTHTTIYRAASI 291
           H HTH L     YI    +I  + HR +IHT+ I  +   L Y    H HT  Y+   I
Sbjct: 44  HRHTHTLMHTNKYIYTHMHIHSHAHR-HIHTH-ICTHAHTLTY---THIHTCTYKRTYI 97


>AB020684-1|BAA74900.1|  580|Homo sapiens KIAA0877 protein protein.
          Length = 580

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 70  CLDDLFFIM-WAYPTFHAHTHLLSQYKTYIIYLFNIIINTHRVYIHTYNISINILLL 237
           C+ ++FF++ W +  F   T + S +  Y++   +I      +YIH  ++++  +L+
Sbjct: 150 CISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVLM 206


>AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41637 fis, clone FEBRA1000030, weakly  similar
           to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
          Length = 207

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
 Frame = +1

Query: 115 HAHTHLLSQYKTYIIYLFNIIINTHRVYIHTYNISINILLLHYI*NRHTHTTIYRAASIS 294
           H HTH LS Y     +L ++ I+TH  + HT+  ++  L  H     HTH  +    +++
Sbjct: 59  HTHTHTLSLY-----WLISLYIHTH-THTHTHTHAVLYLPTH----THTHAVL----TLA 104

Query: 295 WSPVRSRCGHARLNGMSRVAGKYTLALNLR-LTPRTERTSLSLIIY 429
           + P+ +   H   + +S     YT  L+L  LT     T    ++Y
Sbjct: 105 YLPIHTHT-HTHTHTLS-CTSLYTHTLSLHWLTCLYTHTHAHAVLY 148


>BC005152-1|AAH05152.1|  193|Homo sapiens chromosome 16 open reading
           frame 80 protein.
          Length = 193

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 443 KTIKQYIISESDVRSVRGVKRKFSARVYFPATRDIPFKRACPQR 312
           K +K+Y   E  V   + V+R+F A  Y   TR  PF    P R
Sbjct: 81  KNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMR 124


>AF093680-1|AAD40382.1|  193|Homo sapiens transcription factor IIB
           protein.
          Length = 193

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 443 KTIKQYIISESDVRSVRGVKRKFSARVYFPATRDIPFKRACPQR 312
           K +K+Y   E  V   + V+R+F A  Y   TR  PF    P R
Sbjct: 81  KNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMR 124


>AF087845-1|AAP97158.1|  193|Homo sapiens EVORF protein.
          Length = 193

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 443 KTIKQYIISESDVRSVRGVKRKFSARVYFPATRDIPFKRACPQR 312
           K +K+Y   E  V   + V+R+F A  Y   TR  PF    P R
Sbjct: 81  KNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMR 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,333,975
Number of Sequences: 237096
Number of extensions: 1125052
Number of successful extensions: 2934
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2929
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)