Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0689
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    60   2e-11
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 60.5 bits (140), Expect = 2e-11
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = +1

Query: 16  AGNPI-IAGWGDTEFRGPSATHLQVLQLPVVSNDFCAQAYSPYKNQKIDERVLCAGYKKG 192
           AG+ + + GWG T F G  +  LQ   L +++   C   Y  Y N  ++   +CA Y KG
Sbjct: 288 AGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVEC---YKYYGNIMVN--AMCA-YAKG 341

Query: 193 GKDACQGDSGGPLMQPIWNSQTYKTYFYQIGVVSFGKKCAEAGFPGVYARVTHFVPWI 366
            KDACQ DSGGP+   +W +   K     IG++S+G +C +  +P    +V  ++ WI
Sbjct: 342 -KDACQMDSGGPV---LWQNPRTKR-LVNIGIISWGAECGK--YPNGNTKVGSYIDWI 392


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 113 SLLTTGSCRTWRCVADGPRNSVSPQPAMM 27
           S  TT S  T RC   GPR S   Q  M+
Sbjct: 287 SASTTCSGHTVRCFTGGPRKSHESQCPML 315


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 18  RQPHHSRLGGHRVPRSIRNAPPSPAAACGQQRLLCSSVLA 137
           +Q HH +L     P +I+    SPA A  +  L  ++V A
Sbjct: 11  QQFHHQQLFSSANPGTIQACTTSPATASLESSLSAAAVAA 50


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 294 GDHSDLVEVGLVGLRVP 244
           G HS  V  G+VGL++P
Sbjct: 520 GVHSGAVVAGIVGLKMP 536


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/38 (18%), Positives = 18/38 (47%)
 Frame = -3

Query: 721 FVLLLQLFQDNNTSFIPYLIHVMFTLSRLPNYIQINIY 608
           F+L+  + + NN     Y+   +  + + P  + + I+
Sbjct: 466 FILMTTVNEGNNNMAATYMNECLLNIQKSPRTLTLGIF 503


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 436 SHINSTFLRGSQWVITHDPQPSLG 365
           S++NS +  G+Q+     P P  G
Sbjct: 378 SYVNSMYASGAQFATPCTPSPPRG 401


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,548
Number of Sequences: 438
Number of extensions: 3955
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)