Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0686
         (668 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006969-1|AAH06969.1|  352|Homo sapiens dynein, cytoplasmic 2, ...    30   8.6  
AC011242-2|AAY14702.1|  352|Homo sapiens unknown protein.              30   8.6  

>BC006969-1|AAH06969.1|  352|Homo sapiens dynein, cytoplasmic 2,
           light intermediate chain 1 protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 142 PQDLELLLPKIPISNIILGYSYVTSQILSSSNRYVVC 32
           PQD EL+ P  P+  +I+G  Y   Q   S  R V+C
Sbjct: 169 PQDHELIDP-FPVPLVIIGSKYDVFQDFESEKRKVIC 204


>AC011242-2|AAY14702.1|  352|Homo sapiens unknown protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 142 PQDLELLLPKIPISNIILGYSYVTSQILSSSNRYVVC 32
           PQD EL+ P  P+  +I+G  Y   Q   S  R V+C
Sbjct: 169 PQDHELIDP-FPVPLVIIGSKYDVFQDFESEKRKVIC 204


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,157,864
Number of Sequences: 237096
Number of extensions: 1685434
Number of successful extensions: 2283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)