Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0685
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...   102   1e-20
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    40   0.078
UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q7NDI4 Cluster: Gll4251 protein; n=1; Gloeobacter viola...    34   2.9  
UniRef50_Q170Y3 Cluster: Putative uncharacterized protein; n=2; ...    34   2.9  
UniRef50_Q4REV2 Cluster: Chromosome 13 SCAF15122, whole genome s...    33   5.1  
UniRef50_UPI0000E20214 Cluster: PREDICTED: similar to NK1 transc...    33   6.8  
UniRef50_UPI0000E7FDCB Cluster: PREDICTED: hypothetical protein;...    33   6.8  
UniRef50_Q9W444 Cluster: CG5937-PA; n=3; Sophophora|Rep: CG5937-...    33   6.8  
UniRef50_A4HMV9 Cluster: Putative uncharacterized protein; n=4; ...    33   9.0  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score =  102 bits (244), Expect = 1e-20
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = +3

Query: 291  SFRLWNELPSTVFPERYDMSFFKRGLWRVLGSRQRLGSAPGIAEVHGRR 437
            + RLWNELPSTVFPERYDMSFFKRGLWRVL  RQRLGSAPGIAEVHGRR
Sbjct: 938  TIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 39.5 bits (88), Expect = 0.078
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +1

Query: 427 MGDGNHLPSGGLYARLPTKAIKKKSSIEFYI 519
           MGDGNH PSG  YA LPT+A  K +S+  ++
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMKLTSLFIFV 31


>UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 85

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 502 SFFFLLPL*ADERTAHLMVSGYRRPWTSAMPGAEPSRCLLPNTLH 368
           +F F +      +T +L+   +R  WTS +PGA+P    L N  H
Sbjct: 24  TFIFQIKFSCFRQTIYLVDDNHRHSWTSTIPGAQPDHRCLVNLRH 68


>UniRef50_Q7NDI4 Cluster: Gll4251 protein; n=1; Gloeobacter
           violaceus|Rep: Gll4251 protein - Gloeobacter violaceus
          Length = 761

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = -1

Query: 455 PDGKWLPSPMDFSNARSRAKPLPTAQHSPQASLEEGHVIAFGKHRGGELIPKPEAIILTS 276
           P   W P+   +S   S   P P   HS  A L +G V++ G  +GGE   +P A I + 
Sbjct: 348 PAELWDPATQSWSTLASM--PTPRIYHSIAALLPDGRVLSAGGGQGGESAYRPSAEIYSP 405

Query: 275 VRSFIEIRP 249
              F   RP
Sbjct: 406 PYLFRGPRP 414


>UniRef50_Q170Y3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Aedes aegypti (Yellowfever mosquito)
          Length = 1953

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 235 GVSSYGRISMNERTLVRIIASGFGMSSPPRCFPNAMTCPSSSEACGECWAVGS 393
           G+S+ G    NE T+V ++     M+  P C  N          CGECW  GS
Sbjct: 50  GISTVG----NEDTVVNVLRLFLSMACSPTCTLNGRLLIEVLSKCGECWENGS 98


>UniRef50_Q4REV2 Cluster: Chromosome 13 SCAF15122, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13
           SCAF15122, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 888

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = -1

Query: 467 AYSPPDGKWLPSPMDFSNARSRAKPLP-----TAQHSPQASLEEGHVIAFGKHRGG 315
           AYSPP      SP+  S +R  A+ +P      AQH   AS  +  +++F K RGG
Sbjct: 276 AYSPPVSSLRRSPVSLSGSRGPARVVPIAVTGRAQHQSPASRRD--MVSFAKARGG 329


>UniRef50_UPI0000E20214 Cluster: PREDICTED: similar to NK1
           transcription factor related 2-like,b; n=1; Pan
           troglodytes|Rep: PREDICTED: similar to NK1 transcription
           factor related 2-like,b - Pan troglodytes
          Length = 590

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
 Frame = +1

Query: 298 GFGMSSP---PRCFPNAMTCPSSSEACGEC----WAVGSGXXXXXXXXKSMGDGNHLPSG 456
           G G+  P   PRC  N +  P  +  C       W  GS          S+G  +H P  
Sbjct: 499 GNGVPGPVLAPRCPGNGVLLPVLAPRCPAVHSISWEGGSAGAVTHAHQSSLGHSSHSPPA 558

Query: 457 GLYARLPTKAIKKKSSIEFYIDRARTA*QIYE 552
            L+A L   A+ + SS+   + RA +  + Y+
Sbjct: 559 ALWANLSQSALDEGSSMLDQLARAPSHCEPYQ 590


>UniRef50_UPI0000E7FDCB Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 145

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -1

Query: 443 WLPSPMDFSNARSRA---KPLPTAQHSPQASLEEGHVIAFGKHRGGELIPKPEAIILTSV 273
           W PSP+D S +  R     P P A   P          A G+  GG  +P+P+A+ L S+
Sbjct: 8   WAPSPLDESLSWLRGTPPPPPPAASAHPFRWAGLQAAAAGGRRGGGAALPRPQAVRLQSL 67

Query: 272 RSFIE 258
            +  E
Sbjct: 68  DAVFE 72


>UniRef50_Q9W444 Cluster: CG5937-PA; n=3; Sophophora|Rep: CG5937-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 2016

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 265 NERTLVRIIASGFGMSSPPRCFPNAMTCPSSSEACGECWAVGS 393
           +E T+V ++     M+  P C  N          CGECW +GS
Sbjct: 57  SEDTVVNVLRLFLAMACSPACTLNGRLLIEILSRCGECWEMGS 99


>UniRef50_A4HMV9 Cluster: Putative uncharacterized protein; n=4;
            cellular organisms|Rep: Putative uncharacterized protein
            - Leishmania braziliensis
          Length = 1186

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 238  VSSYGRISMNERTLVRIIASGFGMSSPPRCFPNAMTCPSSSEACGECWA 384
            V+  GR+    R+LVR +A+G G++ P       +T  ++S  C   WA
Sbjct: 1138 VTRCGRMKEERRSLVRFLANGLGVNRPTFPSLQQVTFLAASAWCSNLWA 1186


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,482,192
Number of Sequences: 1657284
Number of extensions: 13511785
Number of successful extensions: 33952
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33933
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)