Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0685
         (701 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060844-1|AAH60844.1|  456|Homo sapiens KIAA1609 protein protein.     31   5.3  
BC023251-1|AAH23251.1|  456|Homo sapiens KIAA1609 protein.             31   5.3  
AB046829-1|BAB13435.1|  473|Homo sapiens KIAA1609 protein protein.     31   5.3  

>BC060844-1|AAH60844.1|  456|Homo sapiens KIAA1609 protein protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 449 GKWLPSPMDFSNARSRAKPLPTAQHSPQASLEE 351
           G W+   +DF    SRAKP  T  +SPQ S +E
Sbjct: 369 GLWVD--VDFGKGHSRAKPTCTTYNSPQLSAQE 399


>BC023251-1|AAH23251.1|  456|Homo sapiens KIAA1609 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 449 GKWLPSPMDFSNARSRAKPLPTAQHSPQASLEE 351
           G W+   +DF    SRAKP  T  +SPQ S +E
Sbjct: 369 GLWVD--VDFGKGHSRAKPTCTTYNSPQLSAQE 399


>AB046829-1|BAB13435.1|  473|Homo sapiens KIAA1609 protein protein.
          Length = 473

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 449 GKWLPSPMDFSNARSRAKPLPTAQHSPQASLEE 351
           G W+   +DF    SRAKP  T  +SPQ S +E
Sbjct: 386 GLWVD--VDFGKGHSRAKPTCTTYNSPQLSAQE 416


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,965,115
Number of Sequences: 237096
Number of extensions: 2025891
Number of successful extensions: 4342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4340
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)