Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0681
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA...    63   5e-09
UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila melanogaste...    56   6e-07
UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA...    49   9e-05
UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep: CG1456...    49   9e-05
UniRef50_UPI00006CCCE3 Cluster: hypothetical protein TTHERM_0034...    33   6.3  
UniRef50_UPI000050FBC8 Cluster: COG2733: Predicted membrane prot...    33   8.3  
UniRef50_A0V916 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_UPI0000D55453 Cluster: PREDICTED: similar to CG14567-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14567-PA - Tribolium castaneum
          Length = 135

 Score = 63.3 bits (147), Expect = 5e-09
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
 Frame = +1

Query: 88  VFMILGAFVKAQRPFYAGLSPIGYPAV----------ETDLLSNRFGED---EEAPIEVR 228
           VF +  A   AQRP YAG  PIG P +           T  + NR GED      P++ R
Sbjct: 6   VFALFIAATVAQRPTYAGSRPIGRPDLASRFKDPEEQSTVAVYNRVGEDGTTARIPVDAR 65

Query: 229 GDGNLINRLNSLPIENQPFWYLNWKAYEALR 321
           GDG L++RLN  P E++PFW LN    EA R
Sbjct: 66  GDGQLVDRLNQWPREHRPFWLLNADHIEASR 96


>UniRef50_Q7KTW1 Cluster: CG33290-PA; n=1; Drosophila
           melanogaster|Rep: CG33290-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 171

 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
 Frame = +1

Query: 199 EDEEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQ----TFQQRPNNF 360
           ++   PI+ RGD + +NRL  LP++ QPFW +N++A EA+R  P+     ++ R N+F
Sbjct: 112 DNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>UniRef50_UPI0000DB6D7C Cluster: PREDICTED: similar to CG33290-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG33290-PA - Apis mellifera
          Length = 138

 Score = 49.2 bits (112), Expect = 9e-05
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +1

Query: 208 EAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALR----KRPQTFQQRPN 354
           + P++  G+ NL+NR+ + P E QPFWY+NW+  +  R     R Q  Q  PN
Sbjct: 79  DLPVDALGNINLVNRIKTWPREKQPFWYINWQQIQEHRGDSKNRAQLVQTEPN 131


>UniRef50_Q9VNY8 Cluster: CG14567-PA; n=2; Sophophora|Rep:
           CG14567-PA - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 49.2 bits (112), Expect = 9e-05
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 208 EAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALR 321
           + PI+  GD   +N L+ LP+E QPFW++N++A EA R
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHR 171


>UniRef50_UPI00006CCCE3 Cluster: hypothetical protein
           TTHERM_00340110; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00340110 - Tetrahymena
           thermophila SB210
          Length = 170

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 18/69 (26%), Positives = 37/69 (53%)
 Frame = -3

Query: 581 IKFSVPFMSAMLSSMVQ*CCQII*TSTKRMRSSLPFRKKIIEIRTSSTVEEFVATVS*FS 402
           I FS+  ++ +L+S    CC+I+     +++ ++   KK+ +I+  S +E  +     + 
Sbjct: 38  ISFSIILINKLLNSTKYFCCEILIQKLFKLKYTVNTIKKVNQIKFQSRIENLL-----YQ 92

Query: 401 MLVFFFCLY 375
           ML+F F  Y
Sbjct: 93  MLLFCFIFY 101


>UniRef50_UPI000050FBC8 Cluster: COG2733: Predicted membrane
           protein; n=1; Brevibacterium linens BL2|Rep: COG2733:
           Predicted membrane protein - Brevibacterium linens BL2
          Length = 440

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 371 FLSIKLFGLCWKVWGLFLRAS*AFQFRYQKGWFSIGKEFNRLIRLPSPRTSI 216
           FLS  +F     VWG   RAS A        WF++   F   + LP P T+I
Sbjct: 55  FLSTHIFTDNTGVWGFVSRASEAAMIGAIADWFAVTALFRHPLGLPIPHTAI 106


>UniRef50_A0V916 Cluster: Putative uncharacterized protein; n=1;
           Delftia acidovorans SPH-1|Rep: Putative uncharacterized
           protein - Delftia acidovorans SPH-1
          Length = 324

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -2

Query: 252 SVNQIAVASDFDRSFLVFPESVR*QISLHGWIPYGTEASVKRSL 121
           SVN + VA   DR+F++FP +V+   SL      GTE ++ + +
Sbjct: 37  SVNALRVAKSVDRTFVLFPAAVQALTSLDRLFQLGTEFNMPQGM 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,784,943
Number of Sequences: 1657284
Number of extensions: 12909681
Number of successful extensions: 30682
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30671
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)