Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0680
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047722-1|AAH47722.1|   74|Homo sapiens hypothetical protein MG...    61   4e-09
AC010134-2|AAX93231.1|   74|Homo sapiens unknown protein.              61   4e-09

>BC047722-1|AAH47722.1|   74|Homo sapiens hypothetical protein
           MGC52110 protein.
          Length = 74

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 257 KDKKTPRECLKDGLVPEECLQLRQSFFECKRSLLDNRRRFRGHKGY 394
           ++ K+PR+CLK+G     C  L+ +FFECKRS+LDNR RFRG KGY
Sbjct: 33  QEGKSPRQCLKEGY----CNSLKYAFFECKRSVLDNRARFRGRKGY 74


>AC010134-2|AAX93231.1|   74|Homo sapiens unknown protein.
          Length = 74

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 257 KDKKTPRECLKDGLVPEECLQLRQSFFECKRSLLDNRRRFRGHKGY 394
           ++ K+PR+CLK+G     C  L+ +FFECKRS+LDNR RFRG KGY
Sbjct: 33  QEGKSPRQCLKEGY----CNSLKYAFFECKRSVLDNRARFRGRKGY 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,588,462
Number of Sequences: 237096
Number of extensions: 1605381
Number of successful extensions: 6096
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6094
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)