Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0677
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   2.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   3.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.8  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 12  RHEEEHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVA 134
           + E++ K E+     IH   +D  K   +  GG+D L  V+
Sbjct: 89  QQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDLLKAVS 129


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 12  RHEEEHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVA 134
           + E++ K E+     IH   +D  K   +  GG+D L  V+
Sbjct: 240 QQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDLLKAVS 280


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 12  RHEEEHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVA 134
           + E++ K E+     IH   +D  K   +  GG+D L  V+
Sbjct: 299 QQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSGGSDLLKAVS 339


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 495 LGWLGGEVAAPGLDAYHC 548
           +GW    VA  G DAY+C
Sbjct: 283 VGWNDWIVAPLGYDAYYC 300


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 424 NVLKYCYVVFEMFYSICK 477
           +VL    + FE +Y+ICK
Sbjct: 157 SVLTILAISFERYYAICK 174


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 424 NVLKYCYVVFEMFYSICK 477
           +VL    + FE +Y+ICK
Sbjct: 157 SVLTILAISFERYYAICK 174


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -2

Query: 92  QKLSHVVNIIMNDYP 48
           + +S  +N+++N+YP
Sbjct: 297 KNISEFINVVLNNYP 311


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 283 ATTAHFNFEQSVMILHLS 230
           A+   F FE++  I+HLS
Sbjct: 199 ASKKQFTFEETFAIIHLS 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,323
Number of Sequences: 336
Number of extensions: 4066
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)