Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0676
         (732 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FI01 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_UPI00015B5241 Cluster: PREDICTED: similar to GA12528-PA...    35   2.4  
UniRef50_UPI0000DB6B30 Cluster: PREDICTED: similar to Sloan-Kett...    35   2.4  
UniRef50_Q8B6R7 Cluster: Large protein; n=11; Dimarhabdovirus su...    33   5.5  
UniRef50_Q4PEP3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_UPI0000F1E8FC Cluster: PREDICTED: similar to C1 inhibit...    33   9.5  

>UniRef50_A2FI01 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1716

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +3

Query: 441 T*KAYFVNFYS*HKLISQYNFIDFSEYNVFV*NISRNINFRCISQIIDVSFP 596
           T + YF +F S HK+   YN+  +  Y+V + N+   +N  CIS II  + P
Sbjct: 527 TIEGYFQDFKSGHKISVYYNYDRY--YDVEIPNVVATMNESCISDIISFTIP 576


>UniRef50_UPI00015B5241 Cluster: PREDICTED: similar to GA12528-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA12528-PA - Nasonia vitripennis
          Length = 390

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 18/65 (27%), Positives = 37/65 (56%)
 Frame = +2

Query: 170 NAESEAVRPTMDGLLDSVFISDVVRVVRSPYEIISLLSVAVAVSDHAWAVLL*GRHYSVV 349
           N +  A+ P++ G++   FI+ ++ +V +PY+   LL+  VA+S + + +      YSV+
Sbjct: 129 NIKLSAILPSIKGIVSMTFITTIMWLVTTPYDDAHLLTYYVAISLYNFVINSVFLQYSVL 188

Query: 350 H*CIY 364
              +Y
Sbjct: 189 LKLLY 193


>UniRef50_UPI0000DB6B30 Cluster: PREDICTED: similar to
           Sloan-Kettering viral oncogene homolog; n=1; Apis
           mellifera|Rep: PREDICTED: similar to Sloan-Kettering
           viral oncogene homolog - Apis mellifera
          Length = 709

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = -1

Query: 231 LIKTESSNPSIVGRTASDSAFEVCTR--GDDRSLQKYKV 121
           L++TES +PS +G+T  +   +VCT+   D+ S+ K+KV
Sbjct: 230 LLRTESCDPSQIGQTQDNIEKKVCTKNDNDEESIVKFKV 268


>UniRef50_Q8B6R7 Cluster: Large protein; n=11; Dimarhabdovirus
           supergroup|Rep: Large protein - Flanders virus
          Length = 2064

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -3

Query: 646 PLDKRIHSKTYLTQKLPGN-ETSIICEIHLKFIFLEIFYTNTLYSEKSIKLY 494
           P DK +  +TYLT+ +    ET I+C++ L+F   ++F  N +YS   + L+
Sbjct: 113 PKDKSLF-RTYLTECVKKTQETGIVCKVFLEFWAKKVFDLNEVYSLDLLNLF 163


>UniRef50_Q4PEP3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 281

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +2

Query: 146 SSPRVHTSNAESEAVRPTMDGLLDSVFISDVVRVVRSPYEIISLLSVAVAVSDH 307
           +SP +  +   ++AV  +MD  +DS  I D++R +  P   ++L  +AV  + H
Sbjct: 112 TSPEIECAAPHTKAVATSMDEEIDSQEIYDLIRSITDPEHPLTLEQLAVVNASH 165


>UniRef50_UPI0000F1E8FC Cluster: PREDICTED: similar to C1 inhibitor;
           n=4; Danio rerio|Rep: PREDICTED: similar to C1 inhibitor
           - Danio rerio
          Length = 604

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -2

Query: 185 PQTRRSRYVHEETIGAYKSTK*SH-RGSESTADFRFPPTGPAQALSSTLGRLGERG 21
           P +R S+ + +E++G + ++  S  +GS++ A+  F P   A ALS+ L  LG RG
Sbjct: 235 PDSRSSKAILQESLGDFSTSVYSRLKGSKAKANLIFSPISIAAALSNLL--LGARG 288


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,529,103
Number of Sequences: 1657284
Number of extensions: 12507363
Number of successful extensions: 30766
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30752
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)