Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0674
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5CE8 Cluster: PREDICTED: hypothetical protein;...    38   0.26 
UniRef50_UPI000155C8E1 Cluster: PREDICTED: similar to Ubiquitin ...    38   0.26 
UniRef50_UPI0000E476CA Cluster: PREDICTED: similar to KIAA0445 p...    33   5.5  

>UniRef50_UPI00015B5CE8 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 308

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 264 QIKLYFINFTEKFLMCENDDCEFPFGHEDLQFV 362
           +I+ + +N TE  LMC +++C +P GH+ L F+
Sbjct: 16  KIRAFQLNHTEAVLMCSSEECIWPVGHQKLTFI 48


>UniRef50_UPI000155C8E1 Cluster: PREDICTED: similar to Ubiquitin
           specific peptidase like 1; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to Ubiquitin specific
           peptidase like 1 - Ornithorhynchus anatinus
          Length = 1102

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 267 IKLYFINFTEKFLMCENDDCEFPFGHEDLQFVKLGND 377
           ++ Y INF E  ++CEN  C +P G++ L  + + +D
Sbjct: 56  LRTYQINFQESIVLCENPQCIYPLGYKPLNKILISSD 92


>UniRef50_UPI0000E476CA Cluster: PREDICTED: similar to KIAA0445
           protein; n=6; Deuterostomia|Rep: PREDICTED: similar to
           KIAA0445 protein - Strongylocentrotus purpuratus
          Length = 2435

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = +3

Query: 459 NIAWGEIEKMNRIYESEDSQLETRLLNSSADRDHVLMKSQ 578
           N A G +++ NR+ ++E S++E  L +S ADRD + +K Q
Sbjct: 68  NPALGNLQEENRMLQNELSRVEDLLSSSRADRDELAIKYQ 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,737,498
Number of Sequences: 1657284
Number of extensions: 9689439
Number of successful extensions: 18483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18473
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)