Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0673
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.0  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 210 YNHMSNYRIFLFDCINLKYIT 148
           +   SN+ +FLFD I +  +T
Sbjct: 67  FRSYSNFSVFLFDIITIVTLT 87


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 49  TVHIIRAPVLT*YICS*KKFILTIIFDCVLQILCDIF 159
           T+H++  P +  +  +   F + ++F CVL IL  I+
Sbjct: 203 TLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIY 239


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 154 YHTIFVERNQK*LLI*IFSNYKYTKLIL 71
           ++ IF+  N    +I + SNY +T++IL
Sbjct: 95  HYLIFIFVNVFFWVIILMSNYAFTRIIL 122



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 112 LTIIFDCVLQILCD 153
           L  +F+C L I+CD
Sbjct: 245 LIFLFNCTLIIMCD 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,220
Number of Sequences: 336
Number of extensions: 4351
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)