Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0673
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058745-1|AAL13974.1|  381|Drosophila melanogaster LP09696p pro...   112   6e-25
AE014297-1417|AAF54727.1|  381|Drosophila melanogaster CG10007-P...   112   6e-25
AY071412-1|AAL49034.1|  419|Drosophila melanogaster RE49527p pro...    29   5.0  
AE014297-4837|AAN14299.1|  492|Drosophila melanogaster CG2003-PB...    29   5.0  
AE014297-4836|AAF57210.1|  492|Drosophila melanogaster CG2003-PA...    29   5.0  
AY069077-1|AAL39222.1|  639|Drosophila melanogaster GH09339p pro...    29   8.8  
AE014297-1954|AAF55141.2|  639|Drosophila melanogaster CG6654-PA...    29   8.8  

>AY058745-1|AAL13974.1|  381|Drosophila melanogaster LP09696p
           protein.
          Length = 381

 Score =  112 bits (269), Expect = 6e-25
 Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = +1

Query: 286 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 465
           +++ FL+L+ +++G+ N L  KWA+  +  GSDG+   F HP + TL MFLGE LC  VF
Sbjct: 2   DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61

Query: 466 KLVYYKTRNTGGHS-----LTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQM 630
           K++   +   G  S     L+  +  F P+ ++   +LD   + +++ GL LTY +SFQM
Sbjct: 62  KVIRLISNRRGVISDLDSILSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQM 121

Query: 631 FRGSIIVFVAVLSMTFSNKQIIKREWLGIVCVIIGL 738
            RG+ ++FV + S  F N  +  R WL I  +  GL
Sbjct: 122 IRGAALIFVGIFSTMFLNHTLTGRHWLAIFTISCGL 157


>AE014297-1417|AAF54727.1|  381|Drosophila melanogaster CG10007-PA
           protein.
          Length = 381

 Score =  112 bits (269), Expect = 6e-25
 Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
 Frame = +1

Query: 286 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 465
           +++ FL+L+ +++G+ N L  KWA+  +  GSDG+   F HP + TL MFLGE LC  VF
Sbjct: 2   DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61

Query: 466 KLVYYKTRNTGGHS-----LTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQM 630
           K++   +   G  S     L+  +  F P+ ++   +LD   + +++ GL LTY +SFQM
Sbjct: 62  KVIRLISNRRGVISDLDSILSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQM 121

Query: 631 FRGSIIVFVAVLSMTFSNKQIIKREWLGIVCVIIGL 738
            RG+ ++FV + S  F N  +  R WL I  +  GL
Sbjct: 122 IRGAALIFVGIFSTMFLNHTLTGRHWLAIFTISCGL 157


>AY071412-1|AAL49034.1|  419|Drosophila melanogaster RE49527p
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 401 STIHSCRPYLCFWVKCYVYL 460
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AE014297-4837|AAN14299.1|  492|Drosophila melanogaster CG2003-PB,
           isoform B protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 401 STIHSCRPYLCFWVKCYVYL 460
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AE014297-4836|AAF57210.1|  492|Drosophila melanogaster CG2003-PA,
           isoform A protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 401 STIHSCRPYLCFWVKCYVYL 460
           + + S  P+L  WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308


>AY069077-1|AAL39222.1|  639|Drosophila melanogaster GH09339p
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = -3

Query: 363 YISPFC----TQRVD*ASHQH-HQGEELLVVCP 280
           Y+ PFC    TQR D   HQ  HQGE  + +CP
Sbjct: 552 YVCPFCSKTFTQRGDCQMHQRTHQGER-IYICP 583


>AE014297-1954|AAF55141.2|  639|Drosophila melanogaster CG6654-PA
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = -3

Query: 363 YISPFC----TQRVD*ASHQH-HQGEELLVVCP 280
           Y+ PFC    TQR D   HQ  HQGE  + +CP
Sbjct: 552 YVCPFCSKTFTQRGDCQMHQRTHQGER-IYICP 583


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,303,798
Number of Sequences: 53049
Number of extensions: 719573
Number of successful extensions: 1901
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)