Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0671
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       25   0.73 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   0.73 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.73 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   0.96 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.8  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 334 EELETHLQELNKKNQ-IQEQQHTKLNEEY 251
           EE E H Q+  +K Q I++Q H+ +++ +
Sbjct: 80  EEQERHKQQQQEKQQKIEQQTHSSIHQHH 108


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 334 EELETHLQELNKKNQ-IQEQQHTKLNEEY 251
           EE E H Q+  +K Q I++Q H+ +++ +
Sbjct: 231 EEQERHKQQQQEKQQKIEQQTHSSIHQHH 259


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 334 EELETHLQELNKKNQ-IQEQQHTKLNEEY 251
           EE E H Q+  +K Q I++Q H+ +++ +
Sbjct: 290 EEQERHKQQQQEKQQKIEQQTHSSIHQHH 318


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
 Frame = -1

Query: 373 IENSEIATLKSKVEELETH----LQELNKKNQIQEQQHTKL----NEEYKCLQLQLKQEM 218
           I + E+   +    E  TH    L+E ++   I  ++  ++    ++++  +Q+QLKQ  
Sbjct: 157 IYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQST 216

Query: 217 AEKLAMMDRNAYLENRISQISEENSKKSSQV 125
            E + M+ R+ +L+ R  +     SK++S++
Sbjct: 217 CEAV-MILRSRFLDARRKR--RNFSKQASEI 244


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 300 LLSSCRCVSNSSTLDFKVAISLFSITNLDFSC 395
           L+S C C ++  +   KV   LFS+++  ++C
Sbjct: 208 LISVCLCGASVHSESSKVLPLLFSVSSSSYNC 239


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 30   VPNSCSPGIH 1
            VP +C+PG+H
Sbjct: 1230 VPQNCAPGLH 1239


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 367 NSEIATLKSKVEELETHLQELNKKNQI 287
           N +I  L   ++ + THL +  KKN I
Sbjct: 258 NVKIPVLCKLIQSIPTHLLDSEKKNFI 284


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 652 VSELETDLQKANEEVQHLQKKI 587
           V +LET + + N EV HL   I
Sbjct: 502 VEKLETLVHQLNTEVLHLSNAI 523


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,636
Number of Sequences: 336
Number of extensions: 1675
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)