Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0670
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115704-1|AAI15705.1|  394|Homo sapiens ZNF578 protein protein.       31   3.3  
BC103904-1|AAI03905.2|  365|Homo sapiens zinc finger protein 578...    31   3.3  
AK055946-1|BAB71051.1|  365|Homo sapiens protein ( Homo sapiens ...    31   3.3  

>BC115704-1|AAI15705.1|  394|Homo sapiens ZNF578 protein protein.
          Length = 394

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 288 QKRFQAQPNRMHGKTQPKMCFTCEKFLSYKITIT 187
           +KR+ A+  R H   +P  C  C K  SYK ++T
Sbjct: 74  EKRYLARHRRCHTSEKPYKCNECGKSFSYKSSLT 107


>BC103904-1|AAI03905.2|  365|Homo sapiens zinc finger protein 578
           protein.
          Length = 365

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 288 QKRFQAQPNRMHGKTQPKMCFTCEKFLSYKITIT 187
           +KR+ A+  R H   +P  C  C K  SYK ++T
Sbjct: 45  EKRYLARHRRCHTSEKPYKCNECGKSFSYKSSLT 78


>AK055946-1|BAB71051.1|  365|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31384 fis, clone NHNPC2000212, moderately
           similar to ZINC FINGER PROTEIN 83. ).
          Length = 365

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 288 QKRFQAQPNRMHGKTQPKMCFTCEKFLSYKITIT 187
           +KR+ A+  R H   +P  C  C K  SYK ++T
Sbjct: 45  EKRYLARHRRCHTSEKPYKCNECGKSFSYKSSLT 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,501,621
Number of Sequences: 237096
Number of extensions: 1370006
Number of successful extensions: 3409
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3409
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)