Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0669
(677 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5N5V7 Cluster: Predicted DNA-binding protein; n=5; Clo... 36 1.2
UniRef50_UPI0000D56246 Cluster: PREDICTED: similar to ribonuclea... 34 2.8
UniRef50_Q5C798 Cluster: SJCHGC08029 protein; n=1; Schistosoma j... 33 4.8
UniRef50_A6QQM3 Cluster: MGC165706 protein; n=9; Mammalia|Rep: M... 33 6.4
UniRef50_A3DHU8 Cluster: Recombinase; n=1; Clostridium thermocel... 33 8.4
UniRef50_A2WS90 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A6RMH5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A1CQ65 Cluster: Vesicle transport v-SNARE protein super... 33 8.4
>UniRef50_A5N5V7 Cluster: Predicted DNA-binding protein; n=5;
Clostridiales|Rep: Predicted DNA-binding protein -
Clostridium kluyveri DSM 555
Length = 122
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +1
Query: 400 PRIQLHVLTHPNMTVFRKCDLDNSIPQPFWIETLSKFSRLVVLDLKFICTDEILNVVGLN 579
PR V T P + F D+ I +P I T+ ++ + ++DL+ + +E +V+G+
Sbjct: 4 PRKWRKVCTLPQINKFGPVDISKDINEPI-IMTVEEYETIRLMDLEGLNQEESASVMGVA 62
Query: 580 CLLLEELNIVSKVDIYKSLFNASVL 654
++ + ++ I KSL N +L
Sbjct: 63 RSTIQRIYDDARKKIAKSLVNGKIL 87
>UniRef50_UPI0000D56246 Cluster: PREDICTED: similar to ribonuclease
P 40kDa subunit; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to ribonuclease P 40kDa subunit -
Tribolium castaneum
Length = 623
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 490 IETLSKFSRLVVLDLKFICTDEILNVVGLNCLLLEELNIVS 612
+E +S L L L F CTD+++ VVG NC ++ L++ S
Sbjct: 96 VEGISGMKHLRSLCLCFDCTDQVIQVVGDNCPFIQCLDVTS 136
>UniRef50_Q5C798 Cluster: SJCHGC08029 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08029 protein - Schistosoma
japonicum (Blood fluke)
Length = 201
Score = 33.5 bits (73), Expect = 4.8
Identities = 28/114 (24%), Positives = 52/114 (45%)
Frame = +1
Query: 223 CLNVINYACYVIEKSCSEGEFDECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDP 402
CLN + + Y +K CS +F + E ++ + + ++ C ++CS + Q
Sbjct: 53 CLNCLLISFYPFQKECSTYDFCDYESQITVIPVAVFVIILC----LICSNQISVQI---- 104
Query: 403 RIQLHVLTHPNMTVFRKCDLDNSIPQPFWIETLSKFSRLVVLDLKFICTDEILN 564
I L +L +F C+ +N I I L +F+ L+V+ +F+ E N
Sbjct: 105 YIGLEIL-----YLFFNCNTENIILVLGLINLLFRFANLLVIYNQFLLIKEYKN 153
>UniRef50_A6QQM3 Cluster: MGC165706 protein; n=9; Mammalia|Rep:
MGC165706 protein - Bos taurus (Bovine)
Length = 522
Score = 33.1 bits (72), Expect = 6.4
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 448 RKCDLDNSIPQPFWIETLSKFSRLVVLDLKFICTDEILNVVGLNCLL-LEEL----NIVS 612
+K LDN+I + IE L +RLV LDL F + I + GL+ L+ LE+L N +S
Sbjct: 67 QKLQLDNNIIEK--IEGLENLTRLVWLDLSF---NNIEAIEGLDTLVNLEDLSLFNNRIS 121
Query: 613 KVDIYKSLFNASVL 654
K+D +L VL
Sbjct: 122 KIDSLDALVKLQVL 135
>UniRef50_A3DHU8 Cluster: Recombinase; n=1; Clostridium thermocellum
ATCC 27405|Rep: Recombinase - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 697
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 624 YINFRDYV*FLEKETIQAHYVEYFVCAYEFEVENDKTTEFRESF 493
Y + +YV +EK+ + + + EY + + EVEND+ EF + F
Sbjct: 619 YGDIEEYVKDIEKQNVSSKFKEY-ISELQKEVENDEDREFMDDF 661
>UniRef50_A2WS90 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 923
Score = 32.7 bits (71), Expect = 8.4
Identities = 19/60 (31%), Positives = 37/60 (61%)
Frame = +1
Query: 487 WIETLSKFSRLVVLDLKFICTDEILNVVGLNCLLLEELNIVSKVDIYKSLFNASVLIRNV 666
W+ ++K S LV L+L+F C E+ NV+ L L ++ ++D+Y + F++S+ +N+
Sbjct: 210 WVHVVNKLSSLVTLNLRF-C--ELQNVI--PSPLNANLTLLEQLDLYGNKFSSSLGAKNL 264
>UniRef50_A6RMH5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 456
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 274 EGEFDECEKKVYSLKCHLMTVLPCRLFDVLCSERT 378
+G DEC VY L L CRLF LC+ RT
Sbjct: 289 DGMQDECANYVYINGPRLTNFLLCRLFTTLCTSRT 323
>UniRef50_A1CQ65 Cluster: Vesicle transport v-SNARE protein
superfamily; n=16; Pezizomycotina|Rep: Vesicle transport
v-SNARE protein superfamily - Aspergillus clavatus
Length = 227
Score = 32.7 bits (71), Expect = 8.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 432 QHDSLPQMRSR*LNTPTILDRNSLEIQSSCRSRPQIHMHRRNTQRSGPELSPSRGTKHSL 611
+ DSL SR L++ L ++L+ + R R +H HRR QR ++ SR + L
Sbjct: 60 RRDSLISQLSRLLDSEATLTASALKQNNLTRHREVLHDHRRELQRLNSAIAESRDRANLL 119
Query: 612 ES 617
+
Sbjct: 120 SN 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,175,233
Number of Sequences: 1657284
Number of extensions: 11655960
Number of successful extensions: 31682
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31676
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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