Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0669
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_54174| Best HMM Match : EGF (HMM E-Value=0.21) 31 1.1
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 30 1.5
SB_54271| Best HMM Match : Patatin (HMM E-Value=7.2e-25) 29 2.6
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 29 4.6
SB_42810| Best HMM Match : Beach (HMM E-Value=0) 28 6.0
SB_18879| Best HMM Match : Pkinase_Tyr (HMM E-Value=7e-36) 28 6.0
SB_32935| Best HMM Match : ATP-synt_8 (HMM E-Value=8.5) 28 8.0
SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 31.1 bits (67), Expect = 0.86
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 292 CEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLDNS 471
CE ++ +++C L +V+P + VL + G P + L L V D D
Sbjct: 3245 CEARIAAVQCGLYSVVPLHVLAVLSPADLETRMCGIPTVDLDFLKAHTTYVAGIKDTDLH 3304
Query: 472 IPQPFWIETLSKFSRLVVLD-LKFICTDEILNV 567
I + FW L FS+ + +KF C E L +
Sbjct: 3305 I-EYFW-NALENFSQDQLRKFIKFACNQERLPI 3335
>SB_54174| Best HMM Match : EGF (HMM E-Value=0.21)
Length = 658
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/72 (22%), Positives = 39/72 (54%)
Frame = +1
Query: 451 KCDLDNSIPQPFWIETLSKFSRLVVLDLKFICTDEILNVVGLNCLLLEELNIVSKVDIYK 630
+CD +S+P+P W +F++++ L + C ++ L + + C+L+ L +V+ +
Sbjct: 348 ECDTVDSMPKPIW--HYYRFTQVLRLTISAACKNKRLKMASVYCVLV-SLVVVAALSGQG 404
Query: 631 SLFNASVLIRNV 666
+ S+ + N+
Sbjct: 405 RSYEGSLTLANL 416
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 394 GDPRIQLHVLTHPNMTVFRKCDLDNSIPQPFWIETLSKFSRLVVLDLK 537
GDP ++L++L P+ T K + P + ETL +S L DLK
Sbjct: 822 GDPYVKLYLLPDPSKTTKLKTKIAKKSQNPTYNETL-VYSNLSAADLK 868
>SB_54271| Best HMM Match : Patatin (HMM E-Value=7.2e-25)
Length = 337
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 575 RPTTLSISSVHMNLRSRTTRRLNFERVSIQNGWGIELSRSHLRKT 441
R TL++ +H N R T R +FE++ +N + R H+ T
Sbjct: 73 RARTLTLGPLHPNFRILQTLRRSFEKILPENAHELASGRLHISLT 117
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 196 RLFQLSIKSCLNVINYACYVIEKSCSEGEFD-ECEKKV 306
R FQLS +SC+ Y CY + + EG + +C+ +V
Sbjct: 3196 RSFQLSDRSCICQSGYVCYNEDLTVLEGNSEKDCQPEV 3233
>SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45)
Length = 1133
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 460 DRICGRLSCWDASTRGAEYEDRHGTGSMFVL 368
DR G WDA+ GA ++HG M VL
Sbjct: 966 DRSMGAKDTWDANKHGAWDANKHGAAGMNVL 996
>SB_42810| Best HMM Match : Beach (HMM E-Value=0)
Length = 667
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = -2
Query: 202 IIFVVV*GATFVKIILVGYVNFNM 131
I+ +V+ A +V+++ VG+VNF+M
Sbjct: 252 ILMLVLGNAAYVRLVAVGFVNFSM 275
>SB_18879| Best HMM Match : Pkinase_Tyr (HMM E-Value=7e-36)
Length = 617
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 363 LFRTNMLPVPWRSSYSAPR--VDASQHDSLPQMRSR*LNTPTILDRNSLEIQSSCRSRPQ 536
L ++ L V SS S P V + ++ P R T T D +S S CR
Sbjct: 80 LSKSEQLSVCDTSSSSQPNGWVRSDVINTRPATRIELTATFTARDCSSFSGGSYCRHDFD 139
Query: 537 IHMHRRNTQRSGPELSPS 590
++ H+ TQ SGP P+
Sbjct: 140 VYAHQSETQYSGPVPDPN 157
>SB_32935| Best HMM Match : ATP-synt_8 (HMM E-Value=8.5)
Length = 133
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 97 ILHIIINNSIFVLSKTYCAHYCVVSTS 17
I+ III + VLS ++C HY V+S+S
Sbjct: 56 IITIIIIIIVDVLSHSHCNHYIVISSS 82
>SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1520
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 417 RVDASQHDSLPQMRSR*LNTPTILDRNSLEIQSSCRSRPQIHMHRRNTQRSGP 575
R + Q + Q S+ + P + R L+ Q S RS Q HM +NT+ P
Sbjct: 395 REQSQQEQTQKQTDSK--SKPLNMSRRDLQRQISPRSNYQTHMDGKNTKTKSP 445
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = -2
Query: 181 GATFVKII-LVGY--VNFNM*KCTFIHYFCDILHIIINNSIFVLSKTYCAHYC 32
GA+F+ I+ + G+ FN + I+Y + L + N+++F+L + C +C
Sbjct: 462 GASFIGILDIAGFEIFQFNSFEQMCINYTNEKLQQLFNHTMFILEQEECLPFC 514
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,247,796
Number of Sequences: 59808
Number of extensions: 397174
Number of successful extensions: 1209
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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